Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq422119 107 2e-17 seq10365 105 8e-17 seq2652 104 3e-16 seq235 91.5 2e-12 seq459479 89.7 6e-12 seq6230 89.7 6e-12 seq79 89.7 6e-12 seq279539 86.0 8e-11 >seq422119 Length=456 Score = 107 bits (118), Expect = 2e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 ||||||||||||||||||||| || | | || |||||||||||||||||| | | Sbjct 137 ACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTG 196 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286 ||||| ||||||||||| ||||||||||||| ||| ||||| |||||| | ||| | Sbjct 197 CGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCCGTCTCCGTCTGCGACTCGATG 256 Query 1628287 ATGGCCGACCAGATCTG 1628303 | || |||| | ||| Sbjct 257 ACCGCGTACCACACCTG 273 >seq10365 Length=12387 Score = 105 bits (116), Expect = 8e-17 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 1630175 CGGCAAAGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGT 1630234 |||| | |||||||| ||||| || ||||||||||| |||||||| || |||||||||| Sbjct 590 CGGCCACCCCGATGCCCCCGGCGGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCGT 649 Query 1630235 AGATGCCCTCGATCGAGTCGGCCTTCATGTCCA 1630267 ||||||||||||| |||| |||||||| ||| Sbjct 650 AGATGCCCTCGATGCTGTCGTCCTTCATGGCCA 682 >seq2652 Length=51787 Score = 104 bits (114), Expect = 3e-16 Identities = 109/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 733110 CGCCACGGCCAAAAGGGCACCGTGGGCAGCGTGCGCTCCACCGAGGACATGCCCTGGTCG 733169 || ||||| || ||||||| | || || | || | || ||||||||||||||| || Sbjct 28910 CGGCACGGGCAGAAGGGCATCCTGAGCCGGCTGTGGCCCGCCGAGGACATGCCCT--TCA 28967 Query 733170 CCGCGCGGCGGCGCCACGCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATG 733229 ||| | | |||| |||||||||||| || |||||||||||| | |||| ||||||||| Sbjct 28968 CCGAGAG-CGGCATGACGCCCGACATCCTGTTCAACCCGCACGGCTTCCCCTCGCGCATG 29026 Query 733230 ACCATGGGCAAGATGCTCGAG 733250 ||||| |||| | | ||||| Sbjct 29027 ACCATCGGCATGCTCATCGAG 29047 >seq235 Length=416785 Score = 91.5 bits (100), Expect = 2e-12 Identities = 89/113 (79%), Gaps = 4/113 (4%) Strand=Plus/Plus Query 512050 CGTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 512109 |||||||||||| |||||| ||||||||||| |||| ||||| || ||| ||||| Sbjct 94279 CGTCATCTCCTTCGACGGCTCCTACGTCAACTACCGGCACTTGGCCCTGCTGTGTGACAC 94338 Query 512110 CATGTGCTGCCGCGG--ATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCG 512160 |||| ||||||||| ||| || ||||| |||| || || ||| ||||||| Sbjct 94339 CATGACCTGCCGCGGCCATC--TGATGGCCATCACTCGACATGGCATCAACCG 94389 >seq459479 Length=4959 Score = 89.7 bits (98), Expect = 6e-12 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || || ||| | |||||||||||||||||| ||||| | || | ||| | Sbjct 765 TGGCCAGCTCTCCAGGCAGCAACAGGCGCACGGCGGTCTGAATCTCCCTCGAGGTGATGG 824 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 || |||||||| | || |||| |||| | ||| | ||||| || | |||| Sbjct 825 TGGAACGCTTGTTGTAATGAGCCAAACGGGAAGACTCCCCAGCAATGCGTTCAAAAATGT 884 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||||||| |||||||||| ||| | ||| || || || ||| || |||| Sbjct 885 CGTTGACAAAGGAGTTCATGATGCCCATGGCCTTTGATGAAATACCGGTGTCAGGATGCA 944 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 | || || | ||||| || Sbjct 945 CTTGTTTCAAGACCTTATA 963 >seq6230 Length=22719 Score = 89.7 bits (98), Expect = 6e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | |||||||||||||||||| ||||| | | ||| || Sbjct 21296 GCCAGCTCTCCTGGCAGCAGCAGGCGCACGGCGGTCTGAATCTCCCTTGAAGTGATGGTA 21355 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||||| |||| |||| ||| | ||| | || || |||| |||||| Sbjct 21356 GAACGCTTGTTGTAGTGAGCCAAACGAGAAGACTCACCAGCAATTCGCTCGAAAATGTCG 21415 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || |||||||||||||||| ||| | ||| ||||| || ||| || || || Sbjct 21416 TTAACAAACGAGTTCATGATACCCATTGCCTTAGAAGAGATACCAGTGTCAGGATGAACT 21475 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 21476 TGCTTCAGCACCTTGTA 21492 >seq79 Length=945648 Score = 89.7 bits (98), Expect = 6e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || ||| | ||| ||||| ||||||||||||||||| | || Sbjct 907577 GCTTGGCCAACTCTCCAGGCAGCAGCAGTCGCACAGCGGTCTGGATCTCGCGTGACGTGA 907518 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || || | || || || ||||||| |||| | Sbjct 907517 TGGTTGACCGCTTGTTGTAATGGGCTAAGCGAGAAGCTTCACCTGCGATGCGCTCGAAAA 907458 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||| |||||||||| ||| | ||| ||||||||| ||| |||| Sbjct 907457 TGTCATTGACAAAAGAGTTCATGATGCCCATTGCTTTGGAGGAGATGCCAGTGTCCGGGT 907398 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 ||||||| || | ||| || || Sbjct 907397 GCACCTGTTTTAACACTTTATA 907376 >seq279539 Length=228 Score = 86.0 bits (94), Expect = 8e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| |||||||| |||| || ||||| ||||||||||| ||||| | ||||||||| Sbjct 72 CATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCCGCTGCTCCTCCTT 131 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 || |||||| || || || || | |||| ||||| |||||| ||||||||||| Sbjct 132 CCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGCTCCAGGTA 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6066012648243916