Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1686 118 8e-22 >seq1686 Length=76845 Score = 118 bits (130), Expect = 8e-22 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 29562 TCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAAT 29621 ||| || | |||||| |||| ||||| || |||||||| |||||||| || || | | Sbjct 57382 TCCTCTAAGACGCAGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAG 57441 Query 29622 GGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAAT 29681 || || ||| || || ||||||||||| | |||| || ||||| || || ||||| Sbjct 57442 AGTACGGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAAT 57501 Query 29682 ACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTC 29741 || || ||||| || | || |||||| | || | |||||| | || || || Sbjct 57502 GCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTC 57561 Query 29742 AAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || |||||||| | |||||| ||||| |||||||| Sbjct 57562 CAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 57606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 382866380801868