Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq79 98.7 7e-15 seq744 95.1 9e-14 >seq79 Length=945648 Score = 98.7 bits (108), Expect = 7e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| |||| ||||||||||||||||||||| || |||| || |||||| ||||| | | Sbjct 899647 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAGAACATTTAGACCTGAA 899588 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||| | || || || || || ||||| | || ||||| || || || || || || || Sbjct 899587 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 899528 Query 282464 ATAACGGCATCTGTTAC 282480 | ||| || | ||| || Sbjct 899527 ACAACAGCGTTTGTAAC 899511 >seq744 Length=172919 Score = 95.1 bits (104), Expect = 9e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||||| |||| ||||||||||| || || || |||||||| | ||| Sbjct 123796 TTTTTGTCCAAGCCATAGGCAATGGCAGCAGCAGTGGGCTCGTTTATAATTCTTAGTACA 123855 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || |||| ||| | || ||||| || || ||||| | || |||||||| || || Sbjct 123856 TTTAGCCCAGAAATGGTCCCGGCATCCTTTGTAGCTTGCCGCTGAGAATCGTTGAAGTAA 123915 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || ||||| | ||| |||| Sbjct 123916 GCTGGTACAGTTACAACAGCAT 123937 Score = 86.0 bits (94), Expect = 5e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||||| |||| |||||||| ||||| || || || || | || ||| Sbjct 129852 TTTTTGTCCAAGCCATATGCAATTGCAGCAGCTGTTGGCTCGTTGATGATACGCAGCACA 129793 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 |||||||||| || |||| |||||||| || || || | || || || || || || Sbjct 129792 TTAAGACCAGAGATAGTTCCAGCATCTTTGGTAGCCTGACGCTGGGAGTCATTGAAGTAG 129733 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACT 282481 ||||| || || || || |||| || ||| Sbjct 129732 GCAGGCACCGTGATCACAGCATTGGTAACT 129703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3716026151051448