Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1686 158 2e-33
seq487837 122 2e-22
seq24 98.7 2e-15
seq90 95.1 2e-14
>seq1686
Length=76845
Score = 158 bits (174), Expect = 2e-33
Identities = 170/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 82586 TCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAG 82645
|||||| | |||||| || | ||| || || ||||||||||| || || || || || ||
Sbjct 57382 TCCTCTAAGACGCAGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAG 57441
Query 82646 AATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTAT 82705
| | | || ||||| || ||||| ||||| ||||| || || || || || ||||| ||
Sbjct 57442 AGTACGGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAAT 57501
Query 82706 TCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTC 82765
|||||||| || || ||||| || || ||||| ||||| || ||| | || || || ||
Sbjct 57502 GCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTC 57561
Query 82766 CAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || |||||||| |||| || || ||||| ||||||||
Sbjct 57562 CAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 57606
>seq487837
Length=248
Score = 122 bits (134), Expect = 2e-22
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || |||||||| || || || ||||| || || || || || || | | ||
Sbjct 245 CGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA 186
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || || |||||||| || || || || ||||| || || ||||||||
Sbjct 185 TCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTG 126
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || ||| | ||||| || || | || || || |||| || ||
Sbjct 125 TCCTGGATCTTGGCCTTTTC----TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATG 70
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||||| | ||||| || || ||||||||
Sbjct 69 GTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35
>seq24
Length=996480
Score = 98.7 bits (108), Expect = 2e-15
Identities = 119/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 60148 AGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCAT 60207
|||||| |||||||||||| | ||||| ||| | || ||| |||| || ||||| |||||
Sbjct 407064 AGCATTGTGGTGGTACTATGTGTCTAAGGGTGTGGAGTACCTAGACACAGTGTTCTTCAT 407123
Query 60208 ACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTT 60267
|| | || |||||||| ||||| || || || || || || || || | || |||||
Sbjct 407124 CCTGCGTAAGAAGTTTAACCAGGTCAGCTTCTTGCATGTCTACCACCACTGCACCATGTT 407183
Query 60268 TACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCA 60309
|| | | ||| | ||||| || ||| | || ||||| ||
Sbjct 407184 CACCCTCTGGTGGATCGGCATCAAGTGGGTGGCAGGAGGACA 407225
>seq90
Length=1540152
Score = 95.1 bits (104), Expect = 2e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766
|||||||||||||| |||||||| || ||||| || || || || | ||||| || ||
Sbjct 1345696 CCTTCCTTATCTTGGATCTTTGCCTTCACATTCTCGATGGTGTCGCTGGGTTCCACCTCG 1345755
Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATAT 82818
| || || || || ||||||||||| || |||||||||||||| || |||
Sbjct 1345756 AGGGTGATGGTTTTCCCTGTCAACGTTTTCACAAATATCTGCATCTTTGTAT 1345807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 975522928049172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |