Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1686 140 3e-28
seq487837 138 1e-27
seq422119 122 8e-23
seq232609 105 6e-18
seq208733 87.8 2e-12
>seq1686
Length=76845
Score = 140 bits (154), Expect = 3e-28
Identities = 152/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| || |||||||| || ||||| ||| || || | | | || || ||||| ||||
Sbjct 57409 GGTTGATTCTTTCTGAATGTTGTAGTCGGACAGAGTACGGCCA-TCTTCCAGCTGTTTGC 57467
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || |||| ||||||||| ||||| |||||||||||||| |||||| ||
Sbjct 57468 CAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 57527
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||||| |||||||||| || | ||||| ||| ||||| ||||| |
Sbjct 57528 TGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGG 57587
Query 133642 TTTTTACGAAAATCTGCAT 133660
|||| || || ||||||||
Sbjct 57588 TTTTCACAAAGATCTGCAT 57606
>seq487837
Length=248
Score = 138 bits (152), Expect = 1e-27
Identities = 157/208 (75%), Gaps = 6/208 (3%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||| ||||| || ||||| ||| || ||| | | | || || ||
Sbjct 236 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAG 178
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || | || |||| ||||||||| || || |||||||||||||| |||
Sbjct 177 CTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGAT 118
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | ||||| |||||| |||||||||| || | ||||| ||| |||||
Sbjct 117 CTTGGCCTT----TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 62
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
|| || || || ||||| |||||||||
Sbjct 61 TGTGAGGGTCTTGACGAAGATCTGCATG 34
>seq422119
Length=456
Score = 122 bits (134), Expect = 8e-23
Identities = 99/120 (83%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923
||||||| |||||||||| |||||| |||||||| ||||| ||||| ||||| || |
Sbjct 129 TGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGT 188
Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCG 148983
||||||||| |||||| |||||||||||||||||||| || ||| || ||| |||||
Sbjct 189 TGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCCGTCTCCGTCTGCG 248
>seq232609
Length=862
Score = 105 bits (116), Expect = 6e-18
Identities = 124/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 148514 GTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGT 148573
||| || |||||| | |||||||| |||||||| ||||| || ||| ||||||| || ||
Sbjct 347 GTAGGGCCCGTGCTCGGCCGCCAGGTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGT 288
Query 148574 CTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCG 148633
|||| || || |||||||||||| ||| | ||| ||| | || | |||| | |
Sbjct 287 CTCGAAGATCTGGCTGTTGAGCAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCATCAG 228
Query 148634 CACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTG 148681
| || |||||||| |||||||| || || | || || |||| |||
Sbjct 227 GATGAAGGCGTCGGCCAGGCCCTGCACCCCAATCCCGATCGGCCTGTG 180
>seq208733
Length=363
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 148264 CCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAA 148323
||||||| ||||| |||| ||||||||| || |||| ||| || || | || || |
Sbjct 30 CCACCTGGAACTCTCCGGAGAGCACGCGGCGGGTGTACAGGTTACTGGTGTAGGGCTCCA 89
Query 148324 ACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCA 148383
|||||||||||||||| ||||| ||||| | |||||||||||| || | |||||
Sbjct 90 TGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATGGGGGCCAGCAGCA 149
Query 148384 G 148384
|
Sbjct 150 G 150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 480392482911520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |