Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq366755 226 3e-54
seq769 118 1e-21
seq20 105 8e-18
>seq366755
Length=774
Score = 226 bits (250), Expect = 3e-54
Identities = 318/444 (72%), Gaps = 2/444 (0%)
Strand=Plus/Plus
Query 162550 ACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGTTCGGTCTCTAGA 162609
||| ||| | |||| |||||| ||| ||| || | || | || ||||| ||
Sbjct 64 ACCTCGTACCGCTTCTTCCACCGCGCCTCCTTGAAGGGCGGCGTCTTCTCCGTCTCCAGG 123
Query 162610 CTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTGGTCTTAAGGGGA 162669
||||| ||| || |||| ||||||| ||||||||||| || |||||||| || ||
Sbjct 124 CTGTTCTTCCCCTGCAGGGCCCTCAGCTGGCGCACCATCTCCAGGTTGGTCTTCAGCGGG 183
Query 162670 AAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTCCGTACAGATCC 162729
||||| |||||| || || | | || |||| ||||| | |||||| ||
Sbjct 184 AAGTCCTGGCCGCACAGGTTGACGAAGTACCTCCAGGGGGCGCTGTGGTTGTACAGGTCG 243
Query 162730 TGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGCTCTCCAAC 162789
| ||||| || |||||||| || || ||||| |||||||| |||||||||| |
Sbjct 244 CCCATGCAGTTGAGGTCGGCCTGCACCCGGCTCCAGCTGGCGTACACCACGCTCTCCAGC 303
Query 162790 CTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCAGTGAG-AA 162848
| |||||| ||||| |||||||| || || | ||| | ||||||| | ||| ||
Sbjct 304 CGGCTGGCGATGAAGACGTTGTCGAAGCAGGAGGCGATCTGCCGCACGGCC-GAGAGGAA 362
Query 162849 CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTAGATGGC 162908
||| ||| || || || ||||| |||||||| || ||||| || ||||||| |||
Sbjct 363 GGTCGACGGCGCCTTGCTGTCCACGTGGACGCAGTACAGGTTCTGGGGCGCGTAGACGGC 422
Query 162909 CCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATACGCTATGGG 162968
|||||| | |||||||| ||| ||||| ||||| |||||||| || ||||| |||||
Sbjct 423 CCTCAGCAGCCTCTCGAAGGTCTGGATCTTGTGGTGGACCACGATGGAGTACGCGATGGG 482
Query 162969 GAACTCAGCCTCCTCGCGACTGAG 162992
|||| ||||||||||| || ||
Sbjct 483 GAACCGGGCCTCCTCGCGGCTCAG 506
>seq769
Length=195200
Score = 118 bits (130), Expect = 1e-21
Identities = 237/347 (68%), Gaps = 6/347 (2%)
Strand=Plus/Minus
Query 162640 CGCACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATAT 162699
||||| ||||| || || || | ||| ||||||||||||||| || | | ||
Sbjct 90469 CGCACGATCTCCGCGTTCGTTTTGATGGGGAAGTCGGTGCCGCAGGTGTTGAGCAGGTAC 90410
Query 162700 TTCCACTTAAC-GCTGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCG 162758
||||| || | || | | | || |||| | ||||| || || || || || ||
Sbjct 90409 CTCCACCGGACCGGCGACTTCATG-AGGTCCTCCATGCAGTTGAGGTCCGCTTGCACCCG 90351
Query 162759 ACTCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACA 162818
||| |||||||| | |||||||||| ||| |||| ||||| || ||| | ||
Sbjct 90350 GGACCAGGACGCGTATATCACGCTCTCCAGCCTGCTGGCCACAAACACGTTGGGCAGGCA 90291
Query 162819 CGAAACTATCCCCATCACGGCCAGTGAGAA--CATCGGGTCCGCTTTCCTATCTACGTGT 162876
|| || || ||| ||||| || ||| | || || | || | || |||||
Sbjct 90290 GGAGACGATGCCCTGGACGGCAAGCCTGAAGGCCTCTGGG--GACTTGCGGTCCACGTGC 90233
Query 162877 ACGCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATC 162936
|||||||| | || || || |||| || |||| ||| | |||||||||||||| ||
Sbjct 90232 ACGCAGTACACGTTGTGGGGCACGTATATAGCCCGCAGGAGCCTCTCGAACATCTCGATT 90173
Query 162937 TTATGGTGTACCACGATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983
|| | ||| ||||| || || ||||| ||||||||||| ||||||
Sbjct 90172 TTCTCGTGGACCACCATGGAGTACGCGATGGGGAACTCCATCTCCTC 90126
>seq20
Length=732769
Score = 105 bits (116), Expect = 8e-18
Identities = 232/345 (67%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005
||||| ||| | ||||| | | || | |||||| ||||| || || || |||||| |
Sbjct 554582 GCCAGCTCTTTCGGGGAGAGGAAATCATCCACGTGGATGAAGGCATCGCCGGGGACGAAG 554523
Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065
|| ||||| |||| ||||| | || || || || || || || || | || |
Sbjct 554522 TTCTCGTAGTTCTGCCTCGACGGCCCAAGGACAATCGGCACTGCGCCCACAGCCAGCGGG 554463
Query 177066 CGGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAAT 177125
||| || || || ||||| ||||| |||| | ||||||||| || | |||||||||
Sbjct 554462 TTGTACAGCTTCTCCGTAATGTAGTCTTTGTGGATGGAGTTCTCGAAGGACAGATAGAAT 554403
Query 177126 TTACAGGAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTTC 177185
|| ||| | || | |||| ||||| | ||| | || || || | | | |
Sbjct 554402 TTGCAGCTGGCTATGATTGGGAAGAAGTTCTGGTCGTTCACGTATTCCCCGAAAGCTTGC 554343
Query 177186 CCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGTG 177244
|| || | || || || | || || |||||| |||||| || || | | |||
Sbjct 554342 CCATAGGCGTGAATCTCCACGTACTTGTAGAGCTCGTTGTAGTA-CTTGACACGGATGTG 554284
Query 177245 GTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTT 177289
||| |||||| |||||||||| |||||| | || |||||||||
Sbjct 554283 CTCGGGGTTCCAGTTGCTGACGATCCAGCAGATTAGCTTGCTCTT 554239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 574808499500800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |