Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq366755 226 3e-54 seq769 118 1e-21 seq20 105 8e-18 >seq366755 Length=774 Score = 226 bits (250), Expect = 3e-54 Identities = 318/444 (72%), Gaps = 2/444 (0%) Strand=Plus/Plus Query 162550 ACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGTTCGGTCTCTAGA 162609 ||| ||| | |||| |||||| ||| ||| || | || | || ||||| || Sbjct 64 ACCTCGTACCGCTTCTTCCACCGCGCCTCCTTGAAGGGCGGCGTCTTCTCCGTCTCCAGG 123 Query 162610 CTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTGGTCTTAAGGGGA 162669 ||||| ||| || |||| ||||||| ||||||||||| || |||||||| || || Sbjct 124 CTGTTCTTCCCCTGCAGGGCCCTCAGCTGGCGCACCATCTCCAGGTTGGTCTTCAGCGGG 183 Query 162670 AAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTCCGTACAGATCC 162729 ||||| |||||| || || | | || |||| ||||| | |||||| || Sbjct 184 AAGTCCTGGCCGCACAGGTTGACGAAGTACCTCCAGGGGGCGCTGTGGTTGTACAGGTCG 243 Query 162730 TGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGCTCTCCAAC 162789 | ||||| || |||||||| || || ||||| |||||||| |||||||||| | Sbjct 244 CCCATGCAGTTGAGGTCGGCCTGCACCCGGCTCCAGCTGGCGTACACCACGCTCTCCAGC 303 Query 162790 CTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCAGTGAG-AA 162848 | |||||| ||||| |||||||| || || | ||| | ||||||| | ||| || Sbjct 304 CGGCTGGCGATGAAGACGTTGTCGAAGCAGGAGGCGATCTGCCGCACGGCC-GAGAGGAA 362 Query 162849 CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTAGATGGC 162908 ||| ||| || || || ||||| |||||||| || ||||| || ||||||| ||| Sbjct 363 GGTCGACGGCGCCTTGCTGTCCACGTGGACGCAGTACAGGTTCTGGGGCGCGTAGACGGC 422 Query 162909 CCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATACGCTATGGG 162968 |||||| | |||||||| ||| ||||| ||||| |||||||| || ||||| ||||| Sbjct 423 CCTCAGCAGCCTCTCGAAGGTCTGGATCTTGTGGTGGACCACGATGGAGTACGCGATGGG 482 Query 162969 GAACTCAGCCTCCTCGCGACTGAG 162992 |||| ||||||||||| || || Sbjct 483 GAACCGGGCCTCCTCGCGGCTCAG 506 >seq769 Length=195200 Score = 118 bits (130), Expect = 1e-21 Identities = 237/347 (68%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 162640 CGCACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATAT 162699 ||||| ||||| || || || | ||| ||||||||||||||| || | | || Sbjct 90469 CGCACGATCTCCGCGTTCGTTTTGATGGGGAAGTCGGTGCCGCAGGTGTTGAGCAGGTAC 90410 Query 162700 TTCCACTTAAC-GCTGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCG 162758 ||||| || | || | | | || |||| | ||||| || || || || || || Sbjct 90409 CTCCACCGGACCGGCGACTTCATG-AGGTCCTCCATGCAGTTGAGGTCCGCTTGCACCCG 90351 Query 162759 ACTCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACA 162818 ||| |||||||| | |||||||||| ||| |||| ||||| || ||| | || Sbjct 90350 GGACCAGGACGCGTATATCACGCTCTCCAGCCTGCTGGCCACAAACACGTTGGGCAGGCA 90291 Query 162819 CGAAACTATCCCCATCACGGCCAGTGAGAA--CATCGGGTCCGCTTTCCTATCTACGTGT 162876 || || || ||| ||||| || ||| | || || | || | || ||||| Sbjct 90290 GGAGACGATGCCCTGGACGGCAAGCCTGAAGGCCTCTGGG--GACTTGCGGTCCACGTGC 90233 Query 162877 ACGCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATC 162936 |||||||| | || || || |||| || |||| ||| | |||||||||||||| || Sbjct 90232 ACGCAGTACACGTTGTGGGGCACGTATATAGCCCGCAGGAGCCTCTCGAACATCTCGATT 90173 Query 162937 TTATGGTGTACCACGATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983 || | ||| ||||| || || ||||| ||||||||||| |||||| Sbjct 90172 TTCTCGTGGACCACCATGGAGTACGCGATGGGGAACTCCATCTCCTC 90126 >seq20 Length=732769 Score = 105 bits (116), Expect = 8e-18 Identities = 232/345 (67%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||| ||| | ||||| | | || | |||||| ||||| || || || |||||| | Sbjct 554582 GCCAGCTCTTTCGGGGAGAGGAAATCATCCACGTGGATGAAGGCATCGCCGGGGACGAAG 554523 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || ||||| |||| ||||| | || || || || || || || || | || | Sbjct 554522 TTCTCGTAGTTCTGCCTCGACGGCCCAAGGACAATCGGCACTGCGCCCACAGCCAGCGGG 554463 Query 177066 CGGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAAT 177125 ||| || || || ||||| ||||| |||| | ||||||||| || | ||||||||| Sbjct 554462 TTGTACAGCTTCTCCGTAATGTAGTCTTTGTGGATGGAGTTCTCGAAGGACAGATAGAAT 554403 Query 177126 TTACAGGAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTTC 177185 || ||| | || | |||| ||||| | ||| | || || || | | | | Sbjct 554402 TTGCAGCTGGCTATGATTGGGAAGAAGTTCTGGTCGTTCACGTATTCCCCGAAAGCTTGC 554343 Query 177186 CCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGTG 177244 || || | || || || | || || |||||| |||||| || || | | ||| Sbjct 554342 CCATAGGCGTGAATCTCCACGTACTTGTAGAGCTCGTTGTAGTA-CTTGACACGGATGTG 554284 Query 177245 GTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTT 177289 ||| |||||| |||||||||| |||||| | || ||||||||| Sbjct 554283 CTCGGGGTTCCAGTTGCTGACGATCCAGCAGATTAGCTTGCTCTT 554239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574808499500800