Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq422119 111 2e-18 seq79 104 3e-16 seq459479 102 1e-15 seq10365 100 4e-15 seq2652 91.5 2e-12 seq6230 89.7 7e-12 seq424168 87.8 3e-11 seq208733 87.8 3e-11 seq2297 87.8 3e-11 seq19981 86.0 9e-11 >seq422119 Length=456 Score = 111 bits (122), Expect = 2e-18 Identities = 89/105 (85%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 262124 GAGACCGGCACGCCCTACATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAG 262183 ||||| ||||||||||||||| | |||||||||||| ||||| | |||||||||||| Sbjct 240 GAGACGGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACCGCAAGAGCAACCAGCAG 181 Query 262184 AACCTGGGCACCACGACAGAG-GCCAACCTGTGCACCGAGATCGT 262227 ||||||||||||| | || | ||||||||||||||||||||| Sbjct 180 AACCTGGGCACCATCA-AGTGCAGCAACCTGTGCACCGAGATCGT 137 >seq79 Length=945648 Score = 104 bits (114), Expect = 3e-16 Identities = 162/229 (71%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 || || ||| | || ||||||||||| || ||| |||||||| || | ||| Sbjct 907376 TATAAAGTGTTAAAACAGGTGCACCCGGACAC---TGGCATCTCCTCCAA--AG-CAATG 907429 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||| ||||| |||| ||||||| || || |||| Sbjct 907430 GGCATCATGAACTCTTTTGTCAATGACATTTTCGAGCGCATCGCAGGTGAAGCTTCTCGC 907489 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 | || | | ||||||||| || ||| | ||||||||||||||||| ||||| Sbjct 907490 TTAGCCCATTACAACAAGCGGTCAACCATCACGTCACGCGAGATCCAGACCGCTGTGCGA 907549 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || |||||| ||||||||| || ||||| |||| Sbjct 907550 CTGCTGCTGCCTGGAGAGTTGGCCAAGCACGCCGTGTCTGAGGGTACCA 907598 >seq459479 Length=4959 Score = 102 bits (112), Expect = 1e-15 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024 ||| ||||| ||||||||||| |||||||||||||| | || ||||| | ||| Sbjct 918 AAGGCCATGGGCATCATGAACTCCTTTGTCAACGACATTTTTGAACGCATTGCTGGGGAG 859 Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACC 725084 | || |||| | | ||||||||| ||| ||| | || | ||||| |||||| Sbjct 858 TCTTCCCGTTTGGCTCATTACAACAAGCGTTCCACCATCACCTCGAGGGAGATTCAGACC 799 Query 725085 GCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 |||||||||||| | ||| || || ||||||| ||||| || || |||||||| Sbjct 798 GCCGTGCGCCTGTTGCTGCCTGGAGAGCTGGCCAAACACGCTGTGTCTGAGGGCAC 743 >seq10365 Length=12387 Score = 100 bits (110), Expect = 4e-15 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 || || ||| ||| |||||||| ||| |||||||||||||| |||||||| |||||| Sbjct 692 TGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAGCAG 633 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 ||||| ||||||||||| | ||||| |||||||| | |||| Sbjct 632 TGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGGGGTGGCCG 590 >seq2652 Length=51787 Score = 91.5 bits (100), Expect = 2e-12 Identities = 106/141 (75%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 1600576 CTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCGTGCGGGTTGATCACAATGTC 1600635 ||| || | | |||| |||||||||||||| |||| | |||||||||||| || ||||| Sbjct 29047 CTCGATGAGCATGCCGATGGTCATGCGCGAGGGGAAGCCGTGCGGGTTGAACAGGATGTC 28988 Query 1600636 GGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTCGGTGGAGCGCACGCTGCCCAC 1600695 |||||| ||| | | || || ||||||||||||||| || | || | || || Sbjct 28987 GGGCGTCATGCCG-CTCTCGGTGA--AGGGCATGTCCTCGGCGGGCCACAGCCGGCTCAG 28931 Query 1600696 GGTGCCCTTTTGGCCGTGGCG 1600716 | ||||||| || ||||| || Sbjct 28930 GATGCCCTTCTGCCCGTGCCG 28910 >seq6230 Length=22719 Score = 89.7 bits (98), Expect = 7e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036 ||||||||||||||||| |||||||| |||| || || | ||| | ||| || Sbjct 21435 ATCATGAACTCGTTTGTTAACGACATTTTCGAGCGAATTGCTGGTGAGTCTTCTCGTTTG 21376 Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096 || | || ||||||||| || ||| | | ||||| |||||||||||||||||| Sbjct 21375 GCTCACTACAACAAGCGTTCTACCATCACTTCAAGGGAGATTCAGACCGCCGTGCGCCTG 21316 Query 725097 ATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | ||| || || ||||| | ||||| || || |||||||| Sbjct 21315 CTGCTGCCAGGAGAGCTGGCTAAACACGCGGTGTCTGAGGGCAC 21272 >seq424168 Length=192 Score = 87.8 bits (96), Expect = 3e-11 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036 ||||||||||| ||||| ||||||| |||| || |||| | ||| || || || Sbjct 32 ATCATGAACTCATTTGTTTACGACATTTTCGAGCGTATCGCCGGTGAGTCCTCCCGTTTG 91 Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096 || | || |||||||||| ||| ||| | | ||||||||||| || ||||| || Sbjct 92 GCTCACTACAACAAGCGCTCCACCATCACTTCAAGGGAGATCCAGACTGCAGTGCGTCTT 151 Query 725097 ATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 | ||| ||| || ||||||| ||||| || || ||||| Sbjct 152 CTGCTGCCCGGAGAGCTGGCCAAACACGCAGTGTCTGAGGG 192 >seq208733 Length=363 Score = 87.8 bits (96), Expect = 3e-11 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 262934 TGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGT 262993 |||| |||| | ||||||||||||| | || | |||||||||||||||| |||| | Sbjct 149 TGCTGCTGGCCCCCATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCA 90 Query 262994 TCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGG 263053 | ||| | ||| || ||| | ||||| |||||||||||||| || || || |||| Sbjct 89 TGGAGCCCTACACCAGTAACCTGTACACCCGCCGCGTGCTCTCCGGAGAGTTCCAGGTGG 30 Query 263054 TCAACC 263059 ||||| Sbjct 29 GCAACC 24 >seq2297 Length=95150 Score = 87.8 bits (96), Expect = 3e-11 Identities = 160/232 (69%), Gaps = 12/232 (5%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| || ||||| || | || | || | |||| ||||| Sbjct 65271 TACAAGGTGCTGAAGCAAGTTCACCCAGATACTG----GCATTTCTTC--CAAGGCCATG 65218 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||| |||||| | || || || | ||||||| | ||| || |||| Sbjct 65217 AAAATCATGAACAGCTTTGTCCATGATATCTTCCAGCGCATCGCCTGCGAATCCTCTCGC 65158 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCCGTG 725090 || | | || ||| |||| || | | || ||| || ||||| |||||||||||| Sbjct 65157 TTGACCCACTACAATAAGC---ACTCAACCGTCACTTCCCGAGAGATTCAGACCGCCGTG 65101 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | ||| ||| || |||| | |||||||| || ||||| |||| Sbjct 65100 CGCCTTCTGTTGCCCGGAGAGTTGGCTAAACACGCCGTGTCTGAGGGAACCA 65049 >seq19981 Length=13813 Score = 86.0 bits (94), Expect = 9e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | || ||||| || || | || || || | || ||||| |||||||||||| Sbjct 2883 CGCTTCAGCAAGGAGGTGCAGGTGACGGAAGCCCGCTGTTTCTACGGTTTCCAGATCGCC 2942 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||| |||||||| | ||| || |||||||| |||||| |||||||| Sbjct 2943 ATGGAGAACATACACTCTGAGATGTACAGCCTGCTGATCGATACCTACATCAAGGAC 2999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7129474554289976