Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1686 123 2e-23 seq487837 113 4e-20 seq90 84.2 2e-11 >seq1686 Length=76845 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || ||||||||||| |||| || || || | || |||||||| || || || || Sbjct 57416 TCTTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCTTCCAGCTGTTTGCCAGCGAAG 57475 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||||| || ||||||||| |||||| ||| | | | Sbjct 57476 ATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 57535 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | |||||||||| ||||| || || || |||| ||||||||| Sbjct 57536 TCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACA 57595 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 57596 AAGATCTGCAT 57606 >seq487837 Length=248 Score = 113 bits (124), Expect = 4e-20 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || |||||| || | || |||||| || |||||||| |||| || ||| || | || Sbjct 243 CAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 184 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || ||||| |||| || ||||||||| | |||| || |||||||| Sbjct 183 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 124 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||| | | | |||||||| | |||||||||| ||||| || Sbjct 123 CTGGATCTTGGCCTT----TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 68 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || | || || || || |||||||| Sbjct 67 CTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35 >seq90 Length=1540152 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 35636 TCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACC 35695 ||||| || ||||||| ||||| | | | | |||||||| | ||||||||| | Sbjct 1345699 TCCTTATCTTGGATCTTTGCCTTCACATTCTCGATGGTGTCGCTGGGTTCCACCTCGAGG 1345758 Query 35696 GTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| ||||| || ||||| |||||||||||||||||||| Sbjct 1345759 GTGATGGTTTTCCCTGTCAACGTTTTCACAAATATCTGCAT 1345799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447969671111840