Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1686 123 2e-23
seq487837 113 4e-20
seq90 84.2 2e-11
>seq1686
Length=76845
Score = 123 bits (136), Expect = 2e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || ||||||||||| |||| || || || | || |||||||| || || || ||
Sbjct 57416 TCTTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCTTCCAGCTGTTTGCCAGCGAAG 57475
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | ||||| || ||||||||| |||||| ||| | | |
Sbjct 57476 ATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 57535
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | |||||||||| ||||| || || || |||| |||||||||
Sbjct 57536 TCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACA 57595
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 57596 AAGATCTGCAT 57606
>seq487837
Length=248
Score = 113 bits (124), Expect = 4e-20
Identities = 153/213 (72%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
|| |||||| || | || |||||| || |||||||| |||| || ||| || | ||
Sbjct 243 CAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 184
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
||||||||||| || ||||| |||| || ||||||||| | |||| || ||||||||
Sbjct 183 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 124
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| |||||| ||| | | | |||||||| | |||||||||| ||||| ||
Sbjct 123 CTGGATCTTGGCCTT----TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 68
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || || | || || || || ||||||||
Sbjct 67 CTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35
>seq90
Length=1540152
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 35636 TCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACC 35695
||||| || ||||||| ||||| | | | | |||||||| | ||||||||| |
Sbjct 1345699 TCCTTATCTTGGATCTTTGCCTTCACATTCTCGATGGTGTCGCTGGGTTCCACCTCGAGG 1345758
Query 35696 GTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| ||||| || ||||| ||||||||||||||||||||
Sbjct 1345759 GTGATGGTTTTCCCTGTCAACGTTTTCACAAATATCTGCAT 1345799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447969671111840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |