Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1736 89.7 4e-13 seq1095 86.0 5e-12 >seq1736 Length=128588 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 || || || ||| | |||||||||| ||||| || || || ||||| || || || ||| Sbjct 23182 CAGGAGGTCCAAGTGACAGAAGCACGGTGTTTCTACGGATTCCAAATCGCGATGGAGAAT 23123 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019 || || || ||||||||||| ||||| || || || ||||||||||| Sbjct 23122 ATCCACTCAGAAATGTACAGCCTTCTCATTGACACCTACATCAAAGA 23076 >seq1095 Length=300654 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 ||||||| |||| || || || | || ||||| || || || |||| || |||| Sbjct 2915 TGATGGCCCTGCCCCCCTGCCACGCCCTGTGCCAGTTCTATGTGTGTGATGGGGAGCTGT 2974 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || |||| || | || || |||||||| |||| || || || ||||| || | Sbjct 2975 CCTGCCAGCTGTACCAGCGGTCCGGAGACATGGGGTTAGGTGTGCCCTTCAACATCGCCA 3034 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 | ||||| ||||||||||| ||||| || ||| Sbjct 3035 GCTATGCCCTGCTCACGTACATGATCGCCCAC 3066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395028441593740