Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq19981 84.2 3e-11 seq1395 82.4 9e-11 >seq19981 Length=13813 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875 || || ||| ||| || || ||||| ||||| ||||| || ||| || | ||||| Sbjct 3638 GCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCTGGCTG 3697 Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935 ||||| ||||| |||||||| || || ||||||||||||||| ||| || |||||| Sbjct 3698 AAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 3757 Query 94936 GGAC 94939 | || Sbjct 3758 GTAC 3761 >seq1395 Length=115546 Score = 82.4 bits (90), Expect = 9e-11 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGG 94886 || ||||| || ||||||||||| ||||| ||| || || || ||| | |||||| |||| Sbjct 12786 GTGGAGGGGATTTTCTTCTCTGGGTCCTT-TGCAGCCATCTACTGGTTAAAGAAGAGAGG 12844 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 |||||||| || ||| || |||||| ||||||||| Sbjct 12845 CCTCATGCCCGGACTCACCTACTCCAATGAGCTTATC 12881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579607050207520