Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq277378 159 1e-33 seq1686 140 1e-27 seq79 113 1e-19 seq744 111 5e-19 seq90 98.7 3e-15 seq358519 84.2 7e-11 seq12148 84.2 7e-11 >seq277378 Length=4497 Score = 159 bits (176), Expect = 1e-33 Identities = 812/1277 (64%), Gaps = 27/1277 (2%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| ||||| || || || || |||||||| || || ||||| || || || Sbjct 2919 GTGGAAATCATTGCCAACGACCAGGGCAACAGAACCACCCCCAGCTACGTAGCCTTCACA 2860 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||| | |||| || ||| |||| || || || | || || || || || Sbjct 2859 GACACCGAGAGGCTGATCGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCCAATAAC 2800 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA-CAAATCTACACAATC 349437 || || || ||||| ||||| | || || ||||| || || | || ||||| Sbjct 2799 ACCGTCTTCGATGCCAAGCGCTTGATCGGCAGAAGGTTCGACGATCCCGTCGTG-CAATC 2741 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 ||| | || || | || || | || || || | | || | || || | |||| Sbjct 2740 AGATATGAAGCACTGGCCCTTCAAGGTAGT--CAGCA-ATGGAGGAAAGCCCAAAGTTGA 2684 Query 349498 GGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTT 349555 || ||||| ||||| || | ||| || || |||| |||||||| || || ||||| Sbjct 2683 AGTGGAATACAAAGGAGAGAGTAAAGCA--TTCAACCCTGAAGAAATCTCCTCCATGGTG 2626 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | |||||||||||||| |||||||| || || | || | | || | |||| || Sbjct 2625 CTGGTTAAAATGAAGGAGATTGCTGAGGCCTACCTGGGGCAGAAGGTGTCAAATGCGGTC 2566 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 || ||||| || || || || || || | ||||| || || ||||| || ||| Sbjct 2565 ATCACTGTCCCCGCGTACTTCAACGACTCTCAGCGCCAGGCCACCAAAGACGCCGGCGTG 2506 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || || ||| | || ||||| || || || || || ||||| || || || || || || Sbjct 2505 ATCGCCGGGCTCAACGTTCTGAGGATCATCAACGAGCCCACGGCAGCCGCCATCGCCTAC 2446 Query 349736 GGGCTTGATAAA---ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || |||||| | ||| | || || | || || ||||| | || || Sbjct 2445 GGCCTGGATAAAGGCAAGAGAG---GGGAGCGCAACGTCCTGATCTTTGACCTGGGCGGA 2389 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 || || || || || || | || || |||| || || || ||||| || || || || Sbjct 2388 GGCACCTTCGACGTGTCCATCCTGACTATTGAGGATGGGATCTTTGAGGTGAAGGCCACC 2329 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 || ||||| || ||||| || || ||||| ||||| || || | || || ||||| Sbjct 2328 GCCGGTGACACGCATCTGGGCGGGGAAGACTTTGACAACCGCATGGTCAACCACTTTGTG 2269 Query 349913 AAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGC 349972 | ||||| ||| | | || | || || | | || || || || | | Sbjct 2268 GAGGAATTCAAGAGAAAGTACAAGAAAGACATCAGTCAGAACAAGAGGGCGGTGAGGAGG 2209 Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032 || | || || || || | || ||| | |||| || || | |||| || || Sbjct 2208 CTGCGCACAGCATGCGAGAGGGCCAAGAGAACCTTGTCCTCCAGCTCCCAGGCCAGCATC 2149 Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092 || || || ||||| || |||| || |||| | || | || || || || ||| Sbjct 2148 GAGATCGACTCTCTCTACGAAGGCATCGACTTCTACACGTCCCTCACCCGGGCACGCTTT 2089 Query 350093 GAAGAATTATGTATG--GATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAA 350150 || || ||| | | ||||| || || | || |||| ||||| || |||| | | Sbjct 2088 GAGGA--GATGAACGCCGATCTCTTCAGGGGCACTCTGGAGCCTGTTGAGAAAGCCCTGA 2031 Query 350151 AAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210 ||||| |||||| ||| ||||| | || | ||| | || || || ||||| | Sbjct 2030 GGGATGCCAAAATGGACAAGTCACAGATCCAGGACATTGTTCTGGTCGGAGGCTCTACCC 1971 Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGA 350269 | ||||| || | || || | || || || || || |||| || | | ||| Sbjct 1970 GAATTCCTAAGATCCAGAAGCTCCTGCAAGATTTCTTCAACGGCAGGGAGCTGAACAAGA 1911 Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCT 350329 | || || ||||| ||||| || || || || || ||||| ||||| | || | | Sbjct 1910 GC-ATCAACCCAGACGAAGCAGTGGCCTACGGGGCGGCTGTCCAGGCTGCCATCCT-CAT 1853 Query 350330 GGAAATAAGAGTTCT---AAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 || | | |||||| || || | || || | | || ||||| |||| || || Sbjct 1852 GG--GTGACAGTTCTGAGAATGTTCAAGACCTGCTGTTGCTGGATGTGGCTCCGCTGTCC 1795 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446 || || | || || | || | ||| ||||| | ||| || | || | || | Sbjct 1794 CTGGGCATTGAGACAGCAGGAGGAGTCATGACCGCTCTCATCAAGCGCAACACGACCATC 1735 Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATT 350506 || || || || |||| || ||||| || || | || |||||||| | || || Sbjct 1734 CCGACCAAGCAGACCCAGACCTTTTCGACCTTCTCCGACAATCAGCCCGGTGTGTTGATC 1675 Query 350507 CAAGTATTTGAAGGTGA 350523 ||||| ||||| || || Sbjct 1674 CAAGTGTTTGAGGGAGA 1658 >seq1686 Length=76845 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || ||||| || || ||||| ||||| || || || || | || || |||||| Sbjct 57395 AGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCT 57454 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || ||||| ||||| ||||| || | ||||| ||||||||||| ||||| || ||| Sbjct 57455 TCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 57514 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || || || || || || | ||| Sbjct 57515 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 57574 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || ||||| ||||| |||||||| Sbjct 57575 TTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 57606 >seq79 Length=945648 Score = 113 bits (124), Expect = 1e-19 Identities = 356/539 (66%), Gaps = 12/539 (2%) Strand=Plus/Plus Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 |||||||||||| | |||||||| || |||||||| || | || || | || || ||| Sbjct 900004 CTTATTTTTGATCTCGGTGGTGGCACGTTTGATGTCTCCATCCTGACCATCGAGGATGGA 900063 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || |||||||| || | || ||||| || || ||||| ||||| ||||| || |||||| Sbjct 900064 ATCTTTGAAGTGAAGTCGACGGCTGGAGACACTCATCTGGGTGGTGAAGACTTCGATAAT 900123 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGA 349950 || | || || || || || || ||||| |||| || | || || | || Sbjct 900124 CGCATGGTCAACCACTTCATTGCCGAGTTCAAGCG-CAAGTACAAGAAGGACATCAGCGA 900182 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 || ||||| | || || || | || || ||||| | || ||||| || | || Sbjct 900183 CAACAAGAGAGCTGTCCGCCGTCTCCGCACCGCCTGTGAGAGAGCCAAGCGCACCCTGTC 900242 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTG-CTGATGGCAAAGATTTCTTTT 350069 || | ||||| || ||| |||||||| || |||| || |||| || |||| Sbjct 900243 CTCCAGCACCCAGGCCAGTATCGAAATTGACTC-CTTGTACGAGGGCATCGACTTCTACA 900301 Query 350070 CATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAAT 350127 | || ||||| | ||||| ||||| || || | | || || || | | || | Sbjct 900302 CCTCCATTACCAGGGCTCGTTTTGAGGA--GCTGAACGCTGACCTGTTCCGTGGCACCTT 900359 Query 350128 GGATCCTGTGGAAAAAGTAT-TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAG 350186 |||||| || | | |||| | | ||||| || ||| |||| ||| | | || Sbjct 900360 GGATCCGGTCG-AGAAGTCTCTCCGTGATGCCAAGATGGACAAAGCCCAGGTCCACGACA 900418 Query 350187 TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT 350246 | || | || || || ||||| || || || || | || | | || || || | Sbjct 900419 TTGTCCTGGTGGGCGGCTCTACGCGAATCCCCAAGATCCAGAAACTGCTGCAAGATTTCT 900478 Query 350247 TTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304 | |||||||| || | | | ||| | || || || ||||||||||| || |||||||| Sbjct 900479 TCAATGGCAAGGAGCTCAACAAGAGC-ATCAACCCTGATGAAGCTGTCGCTTATGGTGC 900536 >seq744 Length=172919 Score = 111 bits (122), Expect = 5e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||||||| | ||||||||||| || || || ||| | ||||| || ||||| |||| Sbjct 123937 ATGCTGTTGTAACTGTACCAGCTTACTTCAACGATTCTCAGCGGCAAGCTACAAAGGATG 123878 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 | || | |||| | ||| ||||||| |||||||| || || || ||||||||||| || | Sbjct 123877 CCGGGACCATTTCTGGGCTAAATGTACTAAGAATTATAAACGAGCCCACTGCTGCTGCCA 123818 Query 349728 TTGCATATGGGCTTGATAAAA 349748 |||| ||||| | || |||| Sbjct 123817 TTGCCTATGGCTTGGACAAAA 123797 Score = 87.8 bits (96), Expect = 5e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 ||||| || ||||||| || || || || ||||| || ||||| |||||||| || Sbjct 129701 ACAGTTACCAATGCTGTGATCACGGTGCCTGCCTACTTCAATGACTCCCAGCGTCAGGCT 129760 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 || ||||||||||| | || | || | ||||| || | || || || || || || Sbjct 129761 ACCAAAGATGCTGGAACTATCTCTGGTCTTAATGTGCTGCGTATCATCAACGAGCCAACA 129820 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 ||||| |||||||||||||| | || |||| Sbjct 129821 GCTGCTGCAATTGCATATGGCTTGGACAAAA 129851 >seq90 Length=1540152 Score = 98.7 bits (108), Expect = 3e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| |||||||| || || |||||||| || ||||||||||| ||||| |||||||| | Sbjct 1345294 CTTTCTGAATATTGTAGTCTGATAATGTGCGTCCATCTTCAAGCTGTTTGCCAGCAAAAA 1345353 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | | || |||||||||||||| |||||| Sbjct 1345354 TCAAGCGCTGCTGATCAGGAGGGATTCCT 1345382 >seq358519 Length=722 Score = 84.2 bits (92), Expect = 7e-11 Identities = 70/82 (85%), Gaps = 3/82 (4%) Strand=Plus/Plus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||||| ||| |||| ||||||| ||||||||| |||||||||||||| ||||||| | Sbjct 298 GGGGGAT-TAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTAGCGGGATCGAT 356 Query 235949 ACCCAGCAT-CTCCATACAATG 235969 ||| |||| ||||| |||||| Sbjct 357 GCCC-GCATCCTCCAAACAATG 377 >seq12148 Length=10046 Score = 84.2 bits (92), Expect = 7e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 423956 TGCATCCTGCTCCGTTAGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAATGTCACT 424015 ||||||||| | |||||||||||||||||||||||| ||| |||| ||| ||| | Sbjct 9452 TGCATCCTGGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCG 9393 Query 424016 GGTTCGATCCCAGTACGGAGCGCTAT 424041 ||||||||||| |||||| | |||| Sbjct 9392 GGTTCGATCCCCGTACGGGCCACTAT 9367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1505525014001844