Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1736 91.5 2e-13 seq405673 89.7 6e-13 seq10365 87.8 2e-12 seq19981 84.2 2e-11 seq10208 84.2 2e-11 >seq1736 Length=128588 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831 ||||||||||| |||| || || || |||| || |||||||| || || | ||||||| Sbjct 22267 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 22326 Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891 ||||| ||||||| | || || ||| ||||||||| ||||| || |||||||| Sbjct 22327 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 22386 Query 74892 ACAAGGCG 74899 || | ||| Sbjct 22387 ACCACGCG 22394 >seq405673 Length=517 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 |||||||||||||| | |||||||| |||||||| || |||||| || || ||||| Sbjct 255 GTGAAGATGTATCGAGGGCTGGCCGAGTCCTTGCCTCCATGCAGCCGGGTGCCGAACTGG 314 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCA 152140 || |||| || ||||| ||||||||| |||||| || ||||| |||| Sbjct 315 CCCAGCGGCTGCAGCAGGTTCAGGTTGTTGCTGCCCACAAAGTTCTGCGCCA 366 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| ||||| |||| ||| || | |||||||| ||| || || || ||||| || Sbjct 255 GTGAAGATGTATCGAGGGCTGGCCGAGTCCTTGCCTCCATGCAGCCGGGTGCCGAACTGG 314 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCA 117416 || ||||| || ||||||||||||||| |||||||||||| || |||| Sbjct 315 CCCAGCGGCTGCAGCAGGTTCAGGTTGTTGCTGCCCACAAAGTTCTGCGCCA 366 >seq10365 Length=12387 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 ||||| |||||| |||| |||||||| ||| ||||| ||||||||||| ||||| ||| Sbjct 695 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 636 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427 |||| |||| ||||||||| | | || || ||||| Sbjct 635 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGG 598 >seq19981 Length=13813 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || || || || ||||| ||||| |||||||||||||| |||| |||||||||||||| Sbjct 9763 TACTCCCCCACACGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGGGAGATGTTCTCCATG 9704 Query 74523 CAGTCGAAAGGGTTCT 74538 ||||||| ||||||| Sbjct 9703 AAGTCGAAGGGGTTCT 9688 >seq10208 Length=12663 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363 ||||||||||||||| | ||| |||||||| ||||| || | || || ||||| || Sbjct 11730 AGTGAAAATGTAACGGGGGCTGGCAGCATCTTTGCCCCCGTTGATGCGGGTGCCGAACTG 11671 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || |||| || || ||| | ||||||| |||||||||||| || |||| ||| || Sbjct 11670 GCCGAGTGGCTGCAGGATGTTGACGTTGTTGCTGCCCACAAAGTTCTGTGCCAGGTTCAC 11611 Query 117424 AATCGT 117429 || || Sbjct 11610 GATGGT 11605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543788047450400