Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq769 291 1e-73 seq366755 286 5e-72 seq5258 150 2e-31 seq12750 93.3 6e-14 >seq769 Length=195200 Score = 291 bits (322), Expect = 1e-73 Identities = 609/893 (68%), Gaps = 22/893 (2%) Strand=Plus/Plus Query 13676 GAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGA 13735 |||| ||| ||| | ||||| |||||||| ||||| || ||| ||||| | || ||||| Sbjct 90119 GAGCGCGGAGGAGATGGAGTTCCCCATCGCGTACTCCATGGTGGTCCACGAGAAAATCGA 90178 Query 13736 GATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGT 13795 |||||||||| | |||||| |||| || |||| || || ||| | |||||||| ||||| Sbjct 90179 GATGTTCGAGAGGCTCCTGCGGGCTATATACGTGCCCCACAACGTGTACTGCGTGCACGT 90238 Query 13796 GGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCC 13855 |||| ||||||| || | |||| | | |||| || ||||| | ||| | || Sbjct 90239 GGACCGCAAGTCCCCAGAGGCCTTCAGGCTTGCCGTCCAGGGCATCGTCTCCTGCCTGCC 90298 Query 13856 TAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCA 13915 |||||| ||||| | ||||| | |||| | |||| |||||| || ||||| Sbjct 90299 CAACGTGTTTGTGGCCAGCAGGCTGGAGAGCGTGATATACGCGTCCTGGTCCCGGGTGCA 90358 Query 13916 GGCCGACCTCAGCTGCATGTCGGACCT--GGACGCCTCCCCCGTCAAGTGGAGGTACCTG 13973 || ||||||| ||||||| |||||| || | || || ||| ||||||||||||| Sbjct 90359 AGCGGACCTCAACTGCATGGAGGACCTCATGAAG--TCGCCGGTCCGGTGGAGGTACCTG 90416 Query 13974 CTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTG 14033 |||||| ||||| | |||||||| |||| || ||| |||||||||||| || || Sbjct 90417 CTCAACACCTGCGGCACCGACTTCCCCATCAAAACGAACGCGGAGATCGTGCGAGCTCTC 90476 Query 14034 AAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGCTGCAC 14093 || || | ||||| |||| | ||||| ||| | | | |||| ||||| | Sbjct 90477 AAACAGCTCGACGGCAGGAACAGCATGGAGTCCGAAGAGACGAACAACTACAAGAAAGGC 90536 Query 14094 CGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGT--GGTCAACACCGGCAGGA 14151 ||| | | | | ||| ||| | || || |||| | || ||| ||| || Sbjct 90537 CGCTGGATGTACCGCCACAACGTGAC--GC-ACGCCGTGATCAGGACAA-ACC----TGA 90588 Query 14152 ACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCA 14211 | |||| || || || |||| | ||| || || | || ||||| ||||| | ||||| Sbjct 90589 AGAAGGATCCTCCCCCAATCAGCACCCCTATGTTCTCTGGGAACGCCTACTTCGTGGTCA 90648 Query 14212 CCCGGGAGTTCGTG-GACTTCGTCCTCAAGGACGAGCCGGT--GGCCCTGCTCATGCACT 14268 |||||||||| ||| | | | || || | | || ||| || || ||||| | | Sbjct 90649 CCCGGGAGTTTGTGAGGCACCTGTCTGAAAG-CCAGGAGGTGCGGTCC--CTCATCGAGT 90705 Query 14269 GGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC- 14327 || |||| || |||||||||||||| ||||||||||||||| ||||||||||| | Sbjct 90706 GGGAGAAGGATACCTACAGCCCCGACGAACACCTGTGGGCCACCCTGCAGAGAATGCCCT 90765 Query 14328 GGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAG 14387 | | || | |||||| || ||||||| | ||||||||| ||||| Sbjct 90766 CCGTCCCCGGCTCCTATCCCC-CCAACAGCAAGTACCAGCAGTCGGACATGGAGGCCATC 90824 Query 14388 GTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCG 14447 | | | | || |||||| |||| || ||||| | | ||| || || | |||||| Sbjct 90825 GCCCGCCTGGTGAAGTGGAGCTACCTGGAAGGGGACGTGAGGAAGGGTGCGCCCTACCCG 90884 Query 14448 CCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG 14507 || ||| ||| | ||| ||| | ||| ||| ||| |||| ||| | | ||| Sbjct 90885 CCCTGCACCGGGACTCACCGAAGAGCCGTGTGCGTCTACGGCACCGGGGACCTCCACTGG 90944 Query 14508 CTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGA 14560 || ||| | ||||| |||||||||||||| ||| ||| |||||| Sbjct 90945 ATGCTCAGCCAGCATCACCTTTTCGCCAACAAGTTTGACCCCGAAGTGGACGA 90997 >seq366755 Length=774 Score = 286 bits (316), Expect = 5e-72 Identities = 304/396 (77%), Gaps = 4/396 (1%) Strand=Plus/Minus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || ||||||| || |||| | ||| |||||||| ||||| |||||| ||||||||||| Sbjct 509 CCGCTGAGCCGCGAGGAGGCCCGGTTCCCCATCGCGTACTCCATCGTGGTCCACCACAAG 450 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 ||| ||| |||||| | || ||||||||| ||||||| || |||||||| ||||||||| Sbjct 449 ATCCAGACCTTCGAGAGGCTGCTGAGGGCCGTCTACGCGCCCCAGAACCTGTACTGCGTC 390 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAG-TTCATCCGGGGCGTCTCGGCC-ATCGCCAGGT 13848 ||||||||| |||| | | || ||| ||| || || ||| |||| |||||| | Sbjct 389 CACGTGGACAGCAAGGC-GCCGTCGACCTTCCTCTCGGCCGTG-CGGCAGATCGCCTCCT 332 Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908 ||||| ||||| | | ||| ||||||| | ||||||||||| | |||||| | Sbjct 331 GCTTCGACAACGTCTTCATCGCCAGCCGGCTGGAGAGCGTGGTGTACGCCAGCTGGAGCC 272 Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGT 13968 | |||||||||||||||| ||||||| |||||| || | | || | ||||||| Sbjct 271 GGGTGCAGGCCGACCTCAACTGCATGGGCGACCTGTACAACCACAGCGCCCCCTGGAGGT 212 Query 13969 ACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGG 14028 || | ||||||||||||| |||||||||||| ||||||||||||||||| ||||| Sbjct 211 ACTTCGTCAACCTGTGCGGCCAGGACTTCCCGCTGAAGACCAACCTGGAGATGGTGCGCC 152 Query 14029 CGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGA 14064 ||||| ||||||| || |||||| |||||||| Sbjct 151 AGCTGAGGGCCCTGCAGGGGAAGAACAGCCTGGAGA 116 >seq5258 Length=27050 Score = 150 bits (166), Expect = 2e-31 Identities = 288/423 (68%), Gaps = 6/423 (1%) Strand=Plus/Plus Query 14178 CCCATCTTTGCGGGAAACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTC 14237 || || || ||||| || ||| | | ||||| ||||| ||||||| |||||| || Sbjct 10577 CCGATGTTCGCGGGCGGGGCCTACATCGTGGTCAGCCGGGCGTTCGTGCGCTTCGTGCTG 10636 Query 14238 AAGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAG 14297 ||||| || | | ||| ||| | ||| ||||| ||||||||||||||| Sbjct 10637 GAGGACCCCAGGGCGCGGCGGCTGATGGAGTGGGCGCAGGACGGCTACAGCCCCGACGAG 10696 Query 14298 CACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTC 14357 |||||||||||| ||||||| ||| ||| |||||||| || ||| || | Sbjct 10697 TTCCTGTGGGCCACGCTGCAGAGGATGCCCGGCGCGCCCGGGTCCATACCCAGCAACCAC 10756 Query 14358 AAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAG 14417 |||||| ||||| | ||| | | || | || |||||||| |||| ||| Sbjct 10757 CGCTACGACGTGACGGACGTCAACGCCCTCGCCCGGCTGGTGAAGTGGCAGTACTTTGAG 10816 Query 14418 GGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATC 14477 |||| ||| || ||| |||||||||||||| ||| |||||| | ||||| Sbjct 10817 GGGGCGGAGTCGAAGGGCGCCATGTACCCGCCTTGCAGGGGCCACCACGTGCGATCCATC 10876 Query 14478 TGCATCTTCGGGTCCGGCGACGTGAAGTG---GCTGAAGAGCGTCCCGCACCTGTTCGCC 14534 ||| ||| ||| ||||||| || || |||| ||| ||||| || |||||| Sbjct 10877 TGCGTCTACGGCGTCGGCGACCTGGGCTGGATGCTGCAGA---AGCCGCAGCTCTTCGCC 10933 Query 14535 AACAAGTTCGACGACGAGACGGACGAGTTCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594 |||||||||||| ||| || ||| ||||||||| ||| ||||| || | |||| Sbjct 10934 AACAAGTTCGACACCGACACCGACCCCATCGCCGTGCACTGCCTGGAGAAGTATCTGCGG 10993 Query 14595 ACC 14597 ||| Sbjct 10994 ACC 10996 >seq12750 Length=9446 Score = 93.3 bits (102), Expect = 6e-14 Identities = 106/141 (75%), Gaps = 6/141 (4%) Strand=Plus/Minus Query 13668 AGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCAC 13727 || |||||||||| || || | |||| ||| | |||| | ||||||| | ||| Sbjct 4086 AGCCCCCTGAGCCGCGAGGAAGAGGAGTACCCCCTGGCCTTC---ATCGTGACCATACAC 4030 Query 13728 AAGA---TCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTAC 13784 ||| | |||||||||| ||| || || | ||| | ||||| ||||||||| ||||| Sbjct 4029 AAGGAGCTGGAGATGTTCGCGCGGCTGCTCCGCGCCGTGTACGCGCCGCAGAACGTCTAC 3970 Query 13785 TGCGTCCACGTGGACTCCAAG 13805 ||||||||||||||| ||||| Sbjct 3969 TGCGTCCACGTGGACGCCAAG 3949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 654612627092480