Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 165 7e-36
>seq1095
Length=300654
Score = 165 bits (182), Expect = 7e-36
Identities = 133/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
|| || || |||||||| || ||||| |||||| |||| ||||| ||||| || ||
Sbjct 2905 GACCTGCCCCTGATGGCCCTGCCCCCCTGCCACGCCCTGTGCCAGTTCTATGTGTGTGAT 2964
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|||||||||||||||||||| || || || || ||||||||||||||||| ||||| |||
Sbjct 2965 GGGGAGCTGTCCTGCCAGCTGTACCAGCGGTCCGGAGACATGGGGTTAGGTGTGCCCTTC 3024
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || || || |||||||||||||||||||| ||
Sbjct 3025 AACATCGCCAGCTATGCCCTGCTCACGTACATGATCGCCCA 3065
Score = 165 bits (182), Expect = 7e-36
Identities = 133/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| |||||||||||||||||||| || || || || |||||||| ||||| |||||||||
Sbjct 3065 TGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACACCTAACCCC 3006
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|||||||| || || || || |||||||||||||||||||||| || ||||| |||
Sbjct 3005 ATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACACACATAGAACTGG 2946
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| |||| |||||| ||||| || |||||||| || || ||
Sbjct 2945 CACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTC 2905
Score = 93.3 bits (102), Expect = 4e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 34288 GGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGG 34347
|||| | || || |||| ||||| ||| || ||||| || ||||| || | ||
Sbjct 2131 GGGGTCAACAAATTCCAAAGAGCTGTCGGAGAAAGGTGTGAAAATTTGGGATGCAAATGG 2190
Query 34348 GTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCC 34407
|| || || ||| |||||||| | || || | ||||||| || |||||||||||
Sbjct 2191 ATCCCGTGATTTTTTGGACAAGAGTGGATTTACTAACAGGGAGGAAGGGGACTTGGGCCC 2250
Query 34408 GGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|| ||||| |||||||||||||||||||| || || ||
Sbjct 2251 TGTTTACGGTTTCCAGTGGAGACACTTTGGTGCTGAATA 2289
Score = 93.3 bits (102), Expect = 4e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || || |||||||||||||||||||| ||||| || ||||||||||| || ||||||
Sbjct 2289 TATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTCCCCTTCCTCC 2230
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | || || | |||||||| ||| || || || || | || ||||| || |||
Sbjct 2229 CTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTC 2170
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCC 7057
|| || ||| ||||| |||| || || | ||||
Sbjct 2169 ACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCCC 2131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445454327434560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |