Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1095 165 7e-36 >seq1095 Length=300654 Score = 165 bits (182), Expect = 7e-36 Identities = 133/161 (83%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 || || || |||||||| || ||||| |||||| |||| ||||| ||||| || || Sbjct 2905 GACCTGCCCCTGATGGCCCTGCCCCCCTGCCACGCCCTGTGCCAGTTCTATGTGTGTGAT 2964 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 |||||||||||||||||||| || || || || ||||||||||||||||| ||||| ||| Sbjct 2965 GGGGAGCTGTCCTGCCAGCTGTACCAGCGGTCCGGAGACATGGGGTTAGGTGTGCCCTTC 3024 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || || || |||||||||||||||||||| || Sbjct 3025 AACATCGCCAGCTATGCCCTGCTCACGTACATGATCGCCCA 3065 Score = 165 bits (182), Expect = 7e-36 Identities = 133/161 (83%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || |||||||||||||||||||| || || || || |||||||| ||||| ||||||||| Sbjct 3065 TGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACACCTAACCCC 3006 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||||| || || || || |||||||||||||||||||||| || ||||| ||| Sbjct 3005 ATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACACACATAGAACTGG 2946 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || |||| |||||| ||||| || |||||||| || || || Sbjct 2945 CACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTC 2905 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 34288 GGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGG 34347 |||| | || || |||| ||||| ||| || ||||| || ||||| || | || Sbjct 2131 GGGGTCAACAAATTCCAAAGAGCTGTCGGAGAAAGGTGTGAAAATTTGGGATGCAAATGG 2190 Query 34348 GTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCC 34407 || || || ||| |||||||| | || || | ||||||| || ||||||||||| Sbjct 2191 ATCCCGTGATTTTTTGGACAAGAGTGGATTTACTAACAGGGAGGAAGGGGACTTGGGCCC 2250 Query 34408 GGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || ||||| |||||||||||||||||||| || || || Sbjct 2251 TGTTTACGGTTTCCAGTGGAGACACTTTGGTGCTGAATA 2289 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||||||||||||||| ||||| || ||||||||||| || |||||| Sbjct 2289 TATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTCCCCTTCCTCC 2230 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | || || | |||||||| ||| || || || || | || ||||| || ||| Sbjct 2229 CTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTC 2170 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCC 7057 || || ||| ||||| |||| || || | |||| Sbjct 2169 ACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCCC 2131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445454327434560