Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1686 147 5e-30
seq487837 118 3e-21
>seq1686
Length=76845
Score = 147 bits (162), Expect = 5e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
||| | |||||| ||||| || || |||||||| || | ||||| |||| || ||| |
Sbjct 57388 AAGACGCAGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAGAGTACG 57447
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
|||||||| ||||| || ||||||||||| || | || ||||| || ||||| |||||
Sbjct 57448 GCCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTC 57507
Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674
|||||| |||||||| ||| ||| || |||||||| || ||||| || | ||
Sbjct 57508 CTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGT 57567
Query 225675 GATCGTCTTGCCCGTCAAAGTTTT 225698
||| |||||||| |||| |||||
Sbjct 57568 GATGGTCTTGCCAGTCAGGGTTTT 57591
>seq487837
Length=248
Score = 118 bits (130), Expect = 3e-21
Identities = 157/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|||| ||| || | ||| || ||||| || || |||| ||||| |||| || || |
Sbjct 248 AGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 189
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| |||||||| || || ||||| || | || ||||| || ||||| ||||||
Sbjct 188 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 129
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| | || |||||||| || ||||| || | |||
Sbjct 128 TTGTCCTGGATCTTGGCCTTTTC----TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTG 73
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| || | || || | ||| | |||||
Sbjct 72 ATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1184874006356712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |