Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1095 156 3e-33 seq964 91.5 1e-13 >seq1095 Length=300654 Score = 156 bits (172), Expect = 3e-33 Identities = 133/164 (81%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 ||||| |||| ||| || |||||||||||||| || | |||||||||||||| |||||| Sbjct 3077 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 3018 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || | ||||||||| || |||| |||||| |||||||| || ||||| || || | | Sbjct 3017 ACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 2958 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877 || || ||||| |||| ||| ||||| || || |||||||| || Sbjct 2957 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAG 2914 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || ||||||||||| ||||| || || |||| ||| || || ||||||| || Sbjct 2277 AAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTCCCCTTCCTCCCTGTTAGTAAAT 2218 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || |||||||||||||| || | ||| || || || ||||| || || || || ||||| Sbjct 2217 CCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTCACACCTTTCTCC 2158 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 || ||||||||||| ||||| ||||| Sbjct 2157 GACAGCTCTTTGGAATTTGTTGACCC 2132 >seq964 Length=218097 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 ||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || || Sbjct 196612 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 196553 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 |||||| ||||| | |||||| ||||| ||||||||||||||| Sbjct 196552 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 196510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403682460269128