Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1095 147 2e-30 >seq1095 Length=300654 Score = 147 bits (162), Expect = 2e-30 Identities = 137/174 (79%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 ||||| |||| ||| || |||||||||||||| || | |||||||||||||| ||||| Sbjct 3077 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 3018 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || | ||||||||| || |||| |||||| ||||| || || ||||| ||||| | Sbjct 3017 ACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 2958 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 27381 || || ||||| || | ||||||||| || || || ||||| ||| || |||| Sbjct 2957 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 2904 Score = 123 bits (136), Expect = 2e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| |||| || || || || || ||||| ||||| ||||| || || |||| ||| Sbjct 2299 CATGTCTTTGTATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTC 2240 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 || || ||||||| || || |||||||||||||| || | ||| || || || || Sbjct 2239 CCCTTCCTCCCTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATC 2180 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 ||| || || || || ||||| || ||||||||||| ||||| ||||| Sbjct 2179 CCAAATTTTCACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCC 2132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 367250345632388