Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq487837 150 1e-31
seq1686 107 1e-18
>seq487837
Length=248
Score = 150 bits (166), Expect = 1e-31
Identities = 166/220 (75%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||| || ||||| ||| || ||| |||||| ||||||||||| |||| || |||
Sbjct 248 AGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 189
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| ||||||||||||| | |||||| |||| || | ||||||
Sbjct 188 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 129
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGT 44298
|| ||| ||||| ||| ||| | ||||||||| || |||||||||| ||
Sbjct 128 TTGTCCTGGATCTTGGCCTT-----TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGT 74
Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||| || ||||||||||| |||||||| ||||||
Sbjct 73 GATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCATG 34
>seq1686
Length=76845
Score = 107 bits (118), Expect = 1e-18
Identities = 158/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 44114 CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGT 44173
||||| || | || ||||||||||| || || || || |||||||| |||| ||
Sbjct 57383 CCTCTAAGACGCAGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAGA 57442
Query 44174 TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACA 44233
|| | || |||||||| || || || ||||||| | |||||| || | ||| |
Sbjct 57443 GTACGGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATG 57502
Query 44234 CCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCC 44293
|||||||| ||| ||||| ||| | | | |||||||| || |||||||||
Sbjct 57503 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCC 57562
Query 44294 ACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || ||||| || || ||||| ||||| ||||| |||||
Sbjct 57563 AGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 57606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357791671784316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |