Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq854 161 1e-34 seq567 138 2e-27 seq980 98.7 1e-15 >seq854 Length=129104 Score = 161 bits (178), Expect = 1e-34 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410 ||||||||| |||| || || | ||||| |||||||| ||| |||||||| ||||||| Sbjct 58656 TTGACGATCTCGAATCCAACCTTCCCGCCAAAGGTGCTTGGCATCCAGTACTCCGGGGAA 58715 Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470 |||||| ||| |||| || ||||| |||||| | || || |||| || | ||| || Sbjct 58716 CAGATGGGGTTACCCATCAGCCCTTTCAGGGAGTAAGGGGCTCCCATTTCCACCATGGTC 58775 Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530 || || |||| || ||||| | |||||| |||||||||| |||| |||||||||||| Sbjct 58776 TCTCCAAAGACAGCATTGGGCCTGGGCTTCTCCACCAAGAGCCCGGGGTACAGCTCCACT 58835 Query 8531 GCCTCGACGTCTCCGTA 8547 || || | ||||||||| Sbjct 58836 GCGTCAATGTCTCCGTA 58852 Score = 114 bits (126), Expect = 2e-20 Identities = 167/232 (72%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || || | |||||| || |||||||| || || |||||||| ||| || || || Sbjct 60137 TCACCAATGAGGATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGC 60196 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || |||| | ||||| || | |||||| || | |||||||| |||||||||||| Sbjct 60197 TCGCTCTTCAAGATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATC 60256 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATG-TTTTCGGG 9410 ||||| || || |||||||| || ||||| || || || || || | || | || || Sbjct 60257 ATGAGGCCCGGGACCAGGCCGAAGGCCTCGTGCCCCACGGCAAG-CTTGTGCTCCTCAGG 60315 Query 9411 CACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCG-AGGGGGG 9461 || | ||| || ||| ||| | |||||| || | || |||| ||||||| Sbjct 60316 GACATGGGGTGGGTAGTGCATCTCCACCTGCACTTGCTTCACCGTAGGGGGG 60367 Score = 86.0 bits (94), Expect = 9e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 9650 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAAA 9709 ||||| ||||| ||||| |||| ||||||||||| || | || || | | ||| Sbjct 61128 CTTACGCCATGACCCAGGGCTTTGGTGAAGGCCGGTCCCTTCTTCATGTCGGATTTGAAA 61187 Query 9710 AACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATCG 9769 ||||| || ||||| ||||| |||| ||||||||||| | ||| | || || ||||| Sbjct 61188 AACTGATGGGTGAAGTGTTGAGCAAAGAAGGCAAACATCATATTGCTTCCTTGAGGATCA 61247 Query 9770 GGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 9806 ||| ||||| | ||| | || ||| ||||||| Sbjct 61248 GGAATGAAGCGCTTCCTCAACAGCAGTTTCTCCACAA 61284 >seq567 Length=401712 Score = 138 bits (152), Expect = 2e-27 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303 ||||| || ||||||||||| || |||| || ||| || || || |||||||| Sbjct 243636 ATGAGGCGTGTGGTCTGGAAGAGGCGCTCATCGTCCCAGGTGGGGTGCTCCTGTTTCAGC 243695 Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363 || || || |||| |||||| || | |||||||| ||||| ||||||||||| || || Sbjct 243696 ACGTCACAGACCCGGTTGTGCTCACGAAGCCAGATGGTGGCATACATCATGAGTCCTGGG 243755 Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423 | ||| ||||| || || || || || || | || | ||||| || | ||||||| Sbjct 243756 ATCAGCCCAAATGCTTCATGGCCCACGGCAAAGCGGTGCTCCTCGGGGACATGGGGAGGA 243815 Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483 ||| ||||| ||||||||| || || || | || ||||||| ||| || || | || | Sbjct 243816 TAGTGCATGTCCACCTGGACCTCCTTCACTGTAGGAGGATACACTTCCCCATCCACCACC 243875 Query 9484 T 9484 | Sbjct 243876 T 243876 Score = 123 bits (136), Expect = 4e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434 || || |||||||| |||||||||||| |||||||||| ||| ||| ||||||| ||| Sbjct 242369 CCACCAAAGGTGCTAGGCTTCCAGTACTCCGGGGAGCAAATGGGGTTTCCCATGAGTCCT 242428 Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494 || | || | || || ||||| || | ||| |||| || || ||||| ||||| | | Sbjct 242429 TTCAAAGAATATGGGGCTCCCAATTCCACCATGGTCTCTCCAAAAATGGCATTGGGCCTG 242488 Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554 ||||| |||||||| | | | |||| ||||| || || | |||||| || || | Sbjct 242489 GGCTTCTCCACCAATAGGGCAGGATACAACTCCATTGCATCAATGTCTCCATACAGCTCT 242548 Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585 |||||| | || ||||| | ||||||| Sbjct 242549 TCGAGTTCTGTTGCCATCTCTGTCTCTCCTG 242579 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 9926 GGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTAATAGGAGAGATTGGAG 9985 || ||||| ||||| | ||| || || ||||| | | || |||||||||||| || || Sbjct 244968 GGTGTTGGGCAATCTTCAGGTACAGGCGGTAGGGTTCGTGTGTAATAGGAGAGGTTTGAA 245027 Query 9986 AAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATGGGAGGGCTGTCAATCAAA 10045 | |||||||||||| ||| | || || | ||||| | ||||||||||| |||||| Sbjct 245028 TACGCTTCCCAGCTTTTGTAACCATAATCTGAATTGTAGGTAGGAGGGCTGTCGATCAAA 245087 Query 10046 T 10046 | Sbjct 245088 T 245088 >seq980 Length=116416 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 8361 CGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGT 8420 |||||||||| | || || || ||||||||||||||||| || | ||||||| | | Sbjct 22219 CGAACCCCACCTGCCCACCAAACGTGCTGGGCTTCCAGTAGTGTGGTGCGCAGATGGCAT 22160 Query 8421 TCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGA 8480 | ||||||| ||||| || ||||| ||||| |||| ||| | ||||||| ||| || | Sbjct 22159 TTCCCATGAGTCCTTTCAGAGAGAAGGGAGCACCCATCTCCACCATGCTCTGACCAAATA 22100 Query 8481 TGGC 8484 |||| Sbjct 22099 TGGC 22096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712386032817920