Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq854 161 1e-34
seq567 138 2e-27
seq980 98.7 1e-15
>seq854
Length=129104
Score = 161 bits (178), Expect = 1e-34
Identities = 154/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410
||||||||| |||| || || | ||||| |||||||| ||| |||||||| |||||||
Sbjct 58656 TTGACGATCTCGAATCCAACCTTCCCGCCAAAGGTGCTTGGCATCCAGTACTCCGGGGAA 58715
Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470
|||||| ||| |||| || ||||| |||||| | || || |||| || | ||| ||
Sbjct 58716 CAGATGGGGTTACCCATCAGCCCTTTCAGGGAGTAAGGGGCTCCCATTTCCACCATGGTC 58775
Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530
|| || |||| || ||||| | |||||| |||||||||| |||| ||||||||||||
Sbjct 58776 TCTCCAAAGACAGCATTGGGCCTGGGCTTCTCCACCAAGAGCCCGGGGTACAGCTCCACT 58835
Query 8531 GCCTCGACGTCTCCGTA 8547
|| || | |||||||||
Sbjct 58836 GCGTCAATGTCTCCGTA 58852
Score = 114 bits (126), Expect = 2e-20
Identities = 167/232 (72%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| || || | |||||| || |||||||| || || |||||||| ||| || || ||
Sbjct 60137 TCACCAATGAGGATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGC 60196
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
|| |||| | ||||| || | |||||| || | |||||||| ||||||||||||
Sbjct 60197 TCGCTCTTCAAGATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATC 60256
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATG-TTTTCGGG 9410
||||| || || |||||||| || ||||| || || || || || | || | || ||
Sbjct 60257 ATGAGGCCCGGGACCAGGCCGAAGGCCTCGTGCCCCACGGCAAG-CTTGTGCTCCTCAGG 60315
Query 9411 CACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCG-AGGGGGG 9461
|| | ||| || ||| ||| | |||||| || | || |||| |||||||
Sbjct 60316 GACATGGGGTGGGTAGTGCATCTCCACCTGCACTTGCTTCACCGTAGGGGGG 60367
Score = 86.0 bits (94), Expect = 9e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 9650 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAAA 9709
||||| ||||| ||||| |||| ||||||||||| || | || || | | |||
Sbjct 61128 CTTACGCCATGACCCAGGGCTTTGGTGAAGGCCGGTCCCTTCTTCATGTCGGATTTGAAA 61187
Query 9710 AACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATCG 9769
||||| || ||||| ||||| |||| ||||||||||| | ||| | || || |||||
Sbjct 61188 AACTGATGGGTGAAGTGTTGAGCAAAGAAGGCAAACATCATATTGCTTCCTTGAGGATCA 61247
Query 9770 GGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 9806
||| ||||| | ||| | || ||| |||||||
Sbjct 61248 GGAATGAAGCGCTTCCTCAACAGCAGTTTCTCCACAA 61284
>seq567
Length=401712
Score = 138 bits (152), Expect = 2e-27
Identities = 175/241 (73%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303
||||| || ||||||||||| || |||| || ||| || || || ||||||||
Sbjct 243636 ATGAGGCGTGTGGTCTGGAAGAGGCGCTCATCGTCCCAGGTGGGGTGCTCCTGTTTCAGC 243695
Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363
|| || || |||| |||||| || | |||||||| ||||| ||||||||||| || ||
Sbjct 243696 ACGTCACAGACCCGGTTGTGCTCACGAAGCCAGATGGTGGCATACATCATGAGTCCTGGG 243755
Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423
| ||| ||||| || || || || || || | || | ||||| || | |||||||
Sbjct 243756 ATCAGCCCAAATGCTTCATGGCCCACGGCAAAGCGGTGCTCCTCGGGGACATGGGGAGGA 243815
Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483
||| ||||| ||||||||| || || || | || ||||||| ||| || || | || |
Sbjct 243816 TAGTGCATGTCCACCTGGACCTCCTTCACTGTAGGAGGATACACTTCCCCATCCACCACC 243875
Query 9484 T 9484
|
Sbjct 243876 T 243876
Score = 123 bits (136), Expect = 4e-23
Identities = 154/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434
|| || |||||||| |||||||||||| |||||||||| ||| ||| ||||||| |||
Sbjct 242369 CCACCAAAGGTGCTAGGCTTCCAGTACTCCGGGGAGCAAATGGGGTTTCCCATGAGTCCT 242428
Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494
|| | || | || || ||||| || | ||| |||| || || ||||| ||||| | |
Sbjct 242429 TTCAAAGAATATGGGGCTCCCAATTCCACCATGGTCTCTCCAAAAATGGCATTGGGCCTG 242488
Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554
||||| |||||||| | | | |||| ||||| || || | |||||| || || |
Sbjct 242489 GGCTTCTCCACCAATAGGGCAGGATACAACTCCATTGCATCAATGTCTCCATACAGCTCT 242548
Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585
|||||| | || ||||| | |||||||
Sbjct 242549 TCGAGTTCTGTTGCCATCTCTGTCTCTCCTG 242579
Score = 84.2 bits (92), Expect = 3e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 9926 GGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTAATAGGAGAGATTGGAG 9985
|| ||||| ||||| | ||| || || ||||| | | || |||||||||||| || ||
Sbjct 244968 GGTGTTGGGCAATCTTCAGGTACAGGCGGTAGGGTTCGTGTGTAATAGGAGAGGTTTGAA 245027
Query 9986 AAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATGGGAGGGCTGTCAATCAAA 10045
| |||||||||||| ||| | || || | ||||| | ||||||||||| ||||||
Sbjct 245028 TACGCTTCCCAGCTTTTGTAACCATAATCTGAATTGTAGGTAGGAGGGCTGTCGATCAAA 245087
Query 10046 T 10046
|
Sbjct 245088 T 245088
>seq980
Length=116416
Score = 98.7 bits (108), Expect = 1e-15
Identities = 96/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 8361 CGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGT 8420
|||||||||| | || || || ||||||||||||||||| || | ||||||| | |
Sbjct 22219 CGAACCCCACCTGCCCACCAAACGTGCTGGGCTTCCAGTAGTGTGGTGCGCAGATGGCAT 22160
Query 8421 TCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGA 8480
| ||||||| ||||| || ||||| ||||| |||| ||| | ||||||| ||| || |
Sbjct 22159 TTCCCATGAGTCCTTTCAGAGAGAAGGGAGCACCCATCTCCACCATGCTCTGACCAAATA 22100
Query 8481 TGGC 8484
||||
Sbjct 22099 TGGC 22096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712386032817920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |