Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1686 159 8e-34 seq2505 93.3 1e-13 seq90 84.2 5e-11 >seq1686 Length=76845 Score = 159 bits (176), Expect = 8e-34 Identities = 169/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || |||||||| || || || || || |||||||| |||||||| || ||| Sbjct 57603 CAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 57546 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| ||||| |||||||| ||||| || ||||| ||||||| Sbjct 57545 ACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGC 57486 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || |||||||| || |||||||| |||||||| | ||||| |||| || ||| Sbjct 57485 AGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGCCGTACTCTGTCCGACTACAACA 57426 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | || ||||||||||| || || || || || | || ||| Sbjct 57425 TTCAGAAAGAATCAACCCTTCACCTGGTCCTGCGTCTTAGA 57385 >seq2505 Length=101583 Score = 93.3 bits (102), Expect = 1e-13 Identities = 85/106 (80%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| | ||||||||||| |||||||||||||||||| | ||| Sbjct 72742 CAGATCTTCGTGAAAACCTTGACAGGAAAAACCATCACCCTCGAGGTGGAACCCAGTGAC 72683 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG-AATC 178028 ||||||||||| || || ||||| ||||| || ||||| |||| Sbjct 72682 ACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGTAATC 72637 >seq90 Length=1540152 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| | ||||| ||||| |||||||||||||||||| | ||| Sbjct 1345796 CAGATATTTGTGAAAACGTTGACAGGGAAAACCATCACCCTCGAGGTGGAACCCAGCGAC 1345737 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||||||||| || || |||||| || || || ||||| Sbjct 1345736 ACCATCGAGAATGTGAAGGCAAAGATCCAAGATAAGGAAGG 1345696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1196002091618712