Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq14568 95.1 1e-14 seq896 89.7 5e-13 >seq14568 Length=18141 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || ||||||||||| || |||||||||||||||||||| ||||| Sbjct 7783 ATGTAGGTGTCGATCAGCAGGCTGTACATCTCAGAGTGTATGTTCTCCATGGCGATCTGG 7842 Query 17294 AATCCGTAAAAGCATCGGGCTTCCG 17318 || ||||| || || |||||||||| Sbjct 7843 AAACCGTAGAAACAGCGGGCTTCCG 7867 >seq896 Length=134646 Score = 89.7 bits (98), Expect = 5e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || || || || ||||| |||||||||||||||||||| ||||||||||| | Sbjct 21399 GGTCTTTGATGTAGGTGTCAATGAGCAGGCTGTACATTTCGGAGTGGATGTTCTCCATCG 21458 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 | || || |||||||| || || || ||||| | | ||| || ||| Sbjct 21459 CGATTTGGAATCCGTAGAAACACCGTGCTTCTGTCACTTGGACCTCC 21505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515451222343200