Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq246 95.1 8e-15 >seq246 Length=269734 Score = 95.1 bits (104), Expect = 8e-15 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||||| ||||| ||||| | || | || | |||||| || ||||| || ||||| | Sbjct 46572 CAGTGATGTGGGCAATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACAC 46631 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 ||| ||||| || | || | || || | ||| ||||| |||| ||||||||||||| Sbjct 46632 CTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACACACAT 46691 Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 | ||||| | || | || |||||||||| ||||| Sbjct 46692 AGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCAT 46728 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| || ||||| || ||||| ||||| || |||||||| || | ||| ||||| || Sbjct 47378 TATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTCCCCTTCCTCC 47437 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || | | || ||| ||| || ||| | | |||||||||||||||||||| | | Sbjct 47438 CTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTC 47497 Query 97522 ACACC 97526 ||||| Sbjct 47498 ACACC 47502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345415735551800