Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq246 89.7 4e-13 >seq246 Length=269734 Score = 89.7 bits (98), Expect = 4e-13 Identities = 131/184 (71%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 20104 TTTATTAAAGGA-TCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAG 20162 ||| ||| ||| ||||||||||| | ||||| || ||||| || || |||||| Sbjct 47545 TTTGTTACAGGGGTCAACAAATTCCAAAGAGCTGTCGGAGAAAGGTGTGAAAATTTGGGA 47486 Query 20163 CGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGA 20222 ||| ||||||| | ||||| ||| | ||||||| ||| | | || ||||| Sbjct 47485 TGCAAATGGATCCCGTGATTTTTTGGACAAGAGTGGATTTACTAACAGGGAGGAAGGGGA 47426 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAA 20282 ||||| ||||| || || || || |||||||| ||||| |||||||| |||||| | Sbjct 47425 CTTGGGCCCTGTTTACGGTTTCCAGTGGAGACACTTTGGTGCTGAATACAAAGACATGCA 47366 Query 20283 CACA 20286 | || Sbjct 47365 CTCA 47362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397608987094300