Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq1314 89.7 4e-13
>seq1314
Length=105107
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || ||||| || || || ||||||||||||| || || | ||||
Sbjct 43850 AGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 43909
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || || || ||| |||| || || || || || || | ||||||||| ||
Sbjct 43910 TCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 43969
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||||| |||||| || | ||||||| |
Sbjct 43970 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 44029
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| |||| || || ||||| || |||||
Sbjct 44030 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44061
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || ||||| || || || ||||||||||||| || || | ||||
Sbjct 44078 AGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 44137
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || || || ||| |||| || || || || || || | ||||||||| ||
Sbjct 44138 TCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 44197
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||||| |||||| || | ||||||| |
Sbjct 44198 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 44257
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| |||| || || ||||| || |||||
Sbjct 44258 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44289
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || ||||| || || || ||||||||||||| || || | ||||
Sbjct 44306 AGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 44365
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || || || ||| |||| || || || || || || | ||||||||| ||
Sbjct 44366 TCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 44425
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||||| |||||| || | ||| ||| |
Sbjct 44426 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTC 44485
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| |||| ||||| || || || |||||
Sbjct 44486 TTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 44517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 377847267426300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |