Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq896 105 8e-18 seq7729 84.2 3e-11 >seq896 Length=134646 Score = 105 bits (116), Expect = 8e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| || || | ||||| || |||||||| || ||||| || || | ||| | Sbjct 20592 CCTCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCT 20651 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | | ||| || |||||||| || || || || |||||||||||||| ||||||||||||| Sbjct 20652 TCAACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGG 20711 Query 33724 C 33724 | Sbjct 20712 C 20712 >seq7729 Length=25563 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| || || | || || || | |||||||||||||| ||||| | ||| | Sbjct 16361 CCTCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCGGGCATGAGGCCTCTCTTCT 16302 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | | ||| | |||| || || || || || ||||| || || || || |||||||||| Sbjct 16301 TTAACCAGTAGATGGCTGCAAAGGACCCAGAGAAGAAAATCCCCTCCACCGCAGCAAAGG 16242 Query 33724 CAATAAGTCTCTCTCC 33739 | | || |||||| || Sbjct 16241 CCACAATTCTCTCCCC 16226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627268885627200