Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq896 120 4e-22 seq7729 105 1e-17 seq5979 84.2 3e-11 >seq896 Length=134646 Score = 120 bits (132), Expect = 4e-22 Identities = 101/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| || || || |||||||| |||||||| || ||||| || || | ||| | Sbjct 20592 CCTCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCT 20651 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | | ||| || ||||| ||||| |||||||| |||||||||||||| ||||| ||||||| Sbjct 20652 TCAACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGG 20711 Query 50102 CAAC 50105 | || Sbjct 20712 CTAC 20715 >seq7729 Length=25563 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| || || || || ||||| | |||||||||||||| ||||| | ||| | Sbjct 16361 CCTCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCGGGCATGAGGCCTCTCTTCT 16302 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | | ||| | |||| ||||| |||||||| ||||| || || || || || ||||||| Sbjct 16301 TTAACCAGTAGATGGCTGCAAAGGACCCAGAGAAGAAAATCCCCTCCACCGCAGCAAAGG 16242 Query 50102 CAACAAGTCTCTCTCC 50117 | |||| |||||| || Sbjct 16241 CCACAATTCTCTCCCC 16226 >seq5979 Length=32993 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| ||||| || || || ||| || | || || || || ||||| | Sbjct 6434 TCCAGCCGTAGAAGTGCATGCTGGTGAGCTTGCCGTAGTTGGGCTCGGCGATGTGGATGT 6375 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| || || || || ||||||||||| || | ||| || ||||| || ||||| |||| Sbjct 6374 TCAGGGACTGGCTCTGGTCGATGAAGGCCCCGCGGTCGGCGGCCATCTTGATGATGGTCT 6315 Query 78905 TTTGTGGAATTTCCCA 78920 | || | || ||||| Sbjct 6314 TCTGAGAGATCTCCCA 6299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715362145733600