Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq896 111 2e-19
seq7729 93.3 6e-14
seq5979 93.3 6e-14
>seq896
Length=134646
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| || || | |||||||| |||||||| || ||||| || || | ||| |
Sbjct 20592 CCTCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCT 20651
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| | ||| || || || ||||| || ||||| |||||||||||||| ||||| |||||||
Sbjct 20652 TCAACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGG 20711
Query 42207 C 42207
|
Sbjct 20712 C 20712
>seq7729
Length=25563
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| || || | || ||||| | |||||||||||||| ||||| | ||| |
Sbjct 16361 CCTCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCGGGCATGAGGCCTCTCTTCT 16302
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| | ||| | || | ||||| || ||||| ||||| || || || || || |||||||
Sbjct 16301 TTAACCAGTAGATGGCTGCAAAGGACCCAGAGAAGAAAATCCCCTCCACCGCAGCAAAGG 16242
Query 42207 CAATAAGTCTCTCTCC 42222
| | || |||||| ||
Sbjct 16241 CCACAATTCTCTCCCC 16226
>seq5979
Length=32993
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927
|||| ||||| || ||||| || || || ||| ||| | || ||||| ||||| || |
Sbjct 6434 TCCAGCCGTAGAAGTGCATGCTGGTGAGCTTGCCGTAGTTGGGCTCGGCGATGTGGATGT 6375
Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987
||| ||||| || || ||||||||||| || | ||| || ||||| || ||||| ||||
Sbjct 6374 TCAGGGACTGGCTCTGGTCGATGAAGGCCCCGCGGTCGGCGGCCATCTTGATGATGGTCT 6315
Query 70988 TTTGTGGAATTTCCCA 71003
| || | || |||||
Sbjct 6314 TCTGAGAGATCTCCCA 6299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 668423267442400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |