Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq896 111 2e-19 seq7729 93.3 6e-14 seq5979 93.3 6e-14 >seq896 Length=134646 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| || || | |||||||| |||||||| || ||||| || || | ||| | Sbjct 20592 CCTCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCT 20651 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | | ||| || || || ||||| || ||||| |||||||||||||| ||||| ||||||| Sbjct 20652 TCAACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGG 20711 Query 42207 C 42207 | Sbjct 20712 C 20712 >seq7729 Length=25563 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| || || | || ||||| | |||||||||||||| ||||| | ||| | Sbjct 16361 CCTCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCGGGCATGAGGCCTCTCTTCT 16302 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | | ||| | || | ||||| || ||||| ||||| || || || || || ||||||| Sbjct 16301 TTAACCAGTAGATGGCTGCAAAGGACCCAGAGAAGAAAATCCCCTCCACCGCAGCAAAGG 16242 Query 42207 CAATAAGTCTCTCTCC 42222 | | || |||||| || Sbjct 16241 CCACAATTCTCTCCCC 16226 >seq5979 Length=32993 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| ||||| || ||||| || || || ||| ||| | || ||||| ||||| || | Sbjct 6434 TCCAGCCGTAGAAGTGCATGCTGGTGAGCTTGCCGTAGTTGGGCTCGGCGATGTGGATGT 6375 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| ||||| || || ||||||||||| || | ||| || ||||| || ||||| |||| Sbjct 6374 TCAGGGACTGGCTCTGGTCGATGAAGGCCCCGCGGTCGGCGGCCATCTTGATGATGGTCT 6315 Query 70988 TTTGTGGAATTTCCCA 71003 | || | || ||||| Sbjct 6314 TCTGAGAGATCTCCCA 6299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 668423267442400