Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq14568 87.8 3e-12 seq5979 84.2 3e-11 >seq14568 Length=18141 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 ||||||||||||| || || || || ||||| || || ||| ||||| |||||||| | Sbjct 7139 TGGTGGCATTCGCAGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCTGCCATCTTCT 7080 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAG 125547 |||| ||||| || || |||||||| || ||||| | |||||| | || |||| Sbjct 7079 GGCTGAAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAG 7020 Query 125548 ACGAGG 125553 |||||| Sbjct 7019 ACGAGG 7014 >seq5979 Length=32993 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 97209 GAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGC 97268 ||||| || || || ||||| || |||||||| || || ||||| |||||||| | Sbjct 3520 GAGACGGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACCGCAAGAGCAACCAGCAG 3579 Query 97269 CACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 || |||||||||||||| || ||| |||||||| || || || |||||| || Sbjct 3580 AACCTGGGCACCATCAAGTGCAGCAACCTGTGCACCGAGATCGTGGAGTACACC 3633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738060318682400