Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq14568 98.7 9e-16 seq896 98.7 9e-16 >seq14568 Length=18141 Score = 98.7 bits (108), Expect = 9e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 || |||| || || |||||||| || || || || |||||||| || |||||||| || Sbjct 7016 TCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTCAGGCCCGGCATGAGGCCTCGTTTCTTC 7075 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGC 13293 | ||| || || |||||||||||||| || ||||| || ||||| || ||||| || || Sbjct 7076 AGCCAGAAGATGGCAGCAAACGAACCGGAGAAAAAGATCCCTTCCACAGCTGCGAATGC 7134 >seq896 Length=134646 Score = 98.7 bits (108), Expect = 9e-16 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| || || |||||||| || || || ||||| ||||| || || | || || Sbjct 20594 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 20653 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | ||| || || | ||||||||| || || || || |||||||||||||| ||||| ||| Sbjct 20654 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 20713 Query 13295 ATCA 13298 | || Sbjct 20714 ACCA 20717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429281923923480