Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1314 158 3e-33
seq11470 120 7e-22
seq2397 98.7 2e-15
seq1017 98.7 2e-15
seq313 95.1 3e-14
seq896 89.7 1e-12
>seq1314
Length=105107
Score = 158 bits (174), Expect = 3e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 44288 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 44347
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 44348 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 44407
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 44408 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 44467
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || ||||| || || ||||||||
Sbjct 44468 ACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 44517
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 43832 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 43891
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 43892 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 43951
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 43952 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 44011
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||| || || || ||||| ||||||||
Sbjct 44012 ACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44061
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 44060 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 44119
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 44120 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 44179
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 44180 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 44239
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||| || || || ||||| ||||||||
Sbjct 44240 ACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44289
>seq11470
Length=16648
Score = 120 bits (132), Expect = 7e-22
Identities = 111/141 (79%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || |||||||| || || || || || || ||||| ||||| ||||| || ||
Sbjct 13705 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTC 13646
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||||| || || ||||| || || |||||||| ||||| |||||
Sbjct 13645 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATAGTCTTGCCAGTCAGTGTC 13586
Query 104543 TTTACAAATATCTGCATTTTG 104563
|| ||||| ||||||||||||
Sbjct 13585 TTGACAAAGATCTGCATTTTG 13565
>seq2397
Length=69965
Score = 98.7 bits (108), Expect = 2e-15
Identities = 117/157 (75%), Gaps = 4/157 (3%)
Strand=Plus/Minus
Query 78494 TGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATCCTACGA 78553
|||||||| || ||||| ||||| | || ||||| || || | ||||||||||| ||
Sbjct 51469 TGGTGGTACTACATCTCAAAAGGTGTGGAGTACCTGGACACGGTTTTCTTCATCCTGCGG 51410
Query 78554 AAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTTA--CTT 78611
||||| || || || | || || || ||||| || || || | ||| ||||| | ||
Sbjct 51409 AAGAAGTTCAACCAGGTCAGCTTCCTGCATGTGTACCACCACTGTACCATGTTCATCCTC 51350
Query 78612 TGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACA 78648
||| ||||| || || || ||| |||||||||||||
Sbjct 51349 TGG--TGGATCGGGATCAAGTGGGTCGCAGGAGGACA 51315
>seq1017
Length=122867
Score = 98.7 bits (108), Expect = 2e-15
Identities = 119/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 78487 AGCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCAT 78546
|||||| |||||||| ||| | ||||| || | || |||||||| || | ||||||||
Sbjct 118675 AGCATTGTGGTGGTACTATGTGTCTAAGGGTGTGGAGTACCTAGACACAGTGTTCTTCAT 118616
Query 78547 CCTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTT 78606
||| || ||||| ||||| || | || || | ||||| || || || | || |||||
Sbjct 118615 CCTGCGTAAGAAGTTTAACCAGGTCAGCTTCTTGCATGTCTACCACCACTGCACCATGTT 118556
Query 78607 TACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACA 78648
|| | | ||||| || || || ||| | |||||||||||
Sbjct 118555 CACCCTCTGGTGGATCGGCATCAAGTGGGTGGCAGGAGGACA 118514
>seq313
Length=533116
Score = 95.1 bits (104), Expect = 3e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
||||| ||||| ||||||||||| || ||||| || | ||| ||||| ||||| |||||
Sbjct 79882 CCTTCCTTATCTTGAATCTTTGCCTTCACATTCTCGATGGTGTCGCTGGGTTCCACCTCG 79941
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || || || || || || | ||||| |||||||||||||| ||
Sbjct 79942 AGGGTGATGGTTTTCCCTGTCAACGTTTTCACAAATATCTGCATCTT 79988
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
||||||||||||| ||||| |||| || | || ||||| || ||||| ||||||||||
Sbjct 79480 CTTTCTGAATATTGTAGTCTGATAATGTGCGTCCATCTTCAAGCTGTTTGCCAGCAAAAA 79539
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCT 104458
| | | ||| ||||||||||| ||||||
Sbjct 79540 TCAAGCGCTGCTGATCAGGAGGGATTCCT 79568
>seq896
Length=134646
Score = 89.7 bits (98), Expect = 1e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|| || ||||| || || ||||| || ||||| || ||||| ||||| | ||||| |||
Sbjct 20715 GTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCTGG 20656
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
|||||||| || || || ||||| || | || ||||| ||||| |||| ||||| ||
Sbjct 20655 TTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGATCAGCAGAGAT 20596
Query 269258 GA 269259
||
Sbjct 20595 GA 20594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1146622492987920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |