Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq246 123 2e-23 >seq246 Length=269734 Score = 123 bits (136), Expect = 2e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| |||| || || || || | ||||||||||| ||||| || || || | ||| Sbjct 47368 CATGTCTTTGTATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTC 47427 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || ||||||| ||| || ||||| |||||||| || | ||| ||||| || || Sbjct 47428 CCCTTCCTCCCTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATC 47487 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||| || || || || ||||| || ||||||||||| ||||| ||||| Sbjct 47488 CCAAATTTTCACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCC 47535 Score = 118 bits (130), Expect = 7e-22 Identities = 132/175 (75%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 ||||| || | || || |||||||||||||| || |||||||||||||| ||||| Sbjct 46568 AGCCCAGTGATGTGGGCAATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 46627 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || |||||||||| | || |||| |||||| ||||| || || ||||| | || | Sbjct 46628 ACACCTAACCCCATGT-CTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACA 46686 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665 ||| || ||||| |||| || || ||| || || || || || ||| || |||| Sbjct 46687 CACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 46741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338795559463020