Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq17182 86.0 3e-12 seq187201 84.2 1e-11 seq12210 84.2 1e-11 seq2710 84.2 1e-11 seq187352 82.4 4e-11 seq31491 82.4 4e-11 seq25747 82.4 4e-11 seq7228 82.4 4e-11 seq6332 82.4 4e-11 seq2023 82.4 4e-11 seq16 82.4 4e-11 >seq17182 Length=9430 Score = 86.0 bits (94), Expect = 3e-12 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| | | |||||| | |||||||||| ||||||| ||||||||||||| Sbjct 8261 AAAAAAAAAAAACAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCAC 8320 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||| |||| Sbjct 8321 CACGCTCTAACCAACTGAGCTAACCGGCC 8349 >seq187201 Length=380 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 107 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 48 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 47 CTGAGCTAACCGGCC 33 >seq12210 Length=18738 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 7970 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 8029 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 8030 CTGAGCTAACCGGCC 8044 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 9615 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 9674 Query 11528 CC 11529 || Sbjct 9675 CC 9676 >seq2710 Length=69216 Score = 84.2 bits (92), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||| ||| | |||||| | |||||||||| ||||||| ||||||||||||| | Sbjct 25885 AAAAACCAACTGTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCA 25944 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||| |||| Sbjct 25945 CGCTCTAACCAACTGAGCTAACCGGCC 25971 >seq187352 Length=380 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 94 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 35 Query 11528 CC 11529 || Sbjct 34 CC 33 >seq31491 Length=3063 Score = 82.4 bits (90), Expect = 4e-11 Identities = 67/81 (83%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||| ||| ||||||| | |||||||||| ||||||| ||||||||||||| | Sbjct 1658 AAAAACCAACCGTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCA 1599 Query 11503 CGCTCTRACCAACTGAGCTAA 11523 |||||| |||||||||||||| Sbjct 1598 CGCTCTAACCAACTGAGCTAA 1578 >seq25747 Length=4424 Score = 82.4 bits (90), Expect = 4e-11 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || || ||||||| ||||||| ||||||||||||| ||||||| |||||| Sbjct 2383 TGGCCCGTGCGGGGGTCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAAC 2442 Query 11516 TGAGCTAATGGGCC 11529 |||||||| |||| Sbjct 2443 TGAGCTAACCGGCC 2456 >seq7228 Length=38354 Score = 82.4 bits (90), Expect = 4e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||| | |||||||||| ||||||| ||||||||||||| ||| Sbjct 1201 AAAAACGGAAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACG 1260 Query 11505 CTCTRACCAACTGAGCTAA 11523 |||| |||||||||||||| Sbjct 1261 CTCTAACCAACTGAGCTAA 1279 >seq6332 Length=31238 Score = 82.4 bits (90), Expect = 4e-11 Identities = 65/78 (83%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| ||| |||||| | |||||||||| ||||||| ||||||||||||| |||| Sbjct 9579 AAAAACAA--TGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGC 9522 Query 11506 TCTRACCAACTGAGCTAA 11523 ||| |||||||||||||| Sbjct 9521 TCTAACCAACTGAGCTAA 9504 >seq2023 Length=158180 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 54706 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 54647 Query 11528 CC 11529 || Sbjct 54646 CC 54645 >seq16 Length=818198 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 85564 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 85623 Query 11528 CC 11529 || Sbjct 85624 CC 85625 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260459465224240