Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq53 141 1e-28 seq232 132 7e-26 >seq53 Length=402108 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 8735 GCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCC 8794 ||| | ||||||||| | || || || | ||||| |||||||| || ||||||| || Sbjct 394123 GCAGTGTTGACGATCTCGAATCCAACCTTCCCGCCAAAGGTGCTTGGCATCCAGTACTCC 394182 Query 8795 GGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGA 8854 ||||| |||||| || |||| || ||||| ||||| | || || |||| || | Sbjct 394183 GGGGAACAGATGGGATTACCCATCAGCCCTTTCAGGGAGTAAGGGGCTCCCATTTCCACC 394242 Query 8855 ATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAAC 8914 ||| |||| || |||| || ||||| | |||||| |||||||||| |||| ||||| | Sbjct 394243 ATGGTCTCTCCAAAGACAGCATTGGGCCTGGGCTTCTCCACCAAGAGCCCGGGGTACAGC 394302 Query 8915 TCCACAGCCTCGATGTCTCCGTA 8937 ||||| || || ||||||||||| Sbjct 394303 TCCACTGCGTCAATGTCTCCGTA 394325 Score = 120 bits (132), Expect = 4e-22 Identities = 166/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || || || | |||||| || ||||||||||| || | |||||| ||| || || || Sbjct 395598 TCACCAATGAGGATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGC 395657 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 || | ||||| | ||||| || | |||||| || | |||||||| || ||||||||| Sbjct 395658 TCGCTCTTCAGGATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATC 395717 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789 ||||| || ||||||||||| || ||||| || || || || || | || || Sbjct 395718 ATGAGGCCCGGCACCAGGCCGAAGGCCTCGTGCCCCACGGCAAGCTTGTGCTCCTCAGGG 395777 Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCG-AGGGGGG 9839 || | ||| || ||| ||| | |||||| || | || |||| ||||||| Sbjct 395778 ACATGGGGTGGGTAGTGCATCTCCACCTGCACTTGCTTCACCGTAGGGGGG 395828 Score = 86.0 bits (94), Expect = 9e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 10029 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAAA 10088 ||||| ||||| ||||| |||| ||||||||||| || | || || | | ||| Sbjct 396582 CTTACGCCATGACCCAGGGCTTTGGTGAAGGCCGGTCCCTTCTTCATGTCGGATTTGAAA 396641 Query 10089 AACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATCG 10148 ||||| || ||||| ||||| |||| ||||||||||| | ||| | || || ||||| Sbjct 396642 AACTGATGGGTGAAGTGTTGAGCAAAGAAGGCAAACATCATATTGCTTCCTTGAGGATCA 396701 Query 10149 GGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 10185 ||| ||||| | ||| | || ||| ||||||| Sbjct 396702 GGAATGAAGCGCTTCCTCAACAGCAGTTTCTCCACAA 396738 >seq232 Length=316446 Score = 132 bits (146), Expect = 7e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681 ||||| || |||||||| || || | || ||| ||| || || || ||||||| Sbjct 153087 ATGAGGCGTGTGGTCTGGAAGAGGCGCTCATCATCCCAGGTGGGGTGCTCCTGTTTCAGC 153146 Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741 || || || || | |||||| || | |||||||| || || ||||||||||| || || Sbjct 153147 ACGTCACAGACCCGGTTGTGCTCACGAAGCCAGATGGTGGCATACATCATGAGTCCTGGA 153206 Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801 ||||| ||||| || || || || ||||| | || | ||||| || | ||||||| Sbjct 153207 ACCAGCCCAAATGCTTCATGGCCCACAGCAAAGCGGTGCTCCTCGGGGACATGGGGAGGA 153266 Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTC 9854 ||| ||||| ||||||||| || || || || || ||||||| ||| || || Sbjct 153267 TAGTGCATGTCCACCTGGACCTCCTTCACTGAAGGAGGATACACTTCCCCATC 153319 Score = 87.8 bits (96), Expect = 3e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 10305 GGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTAATAGGAGAGATTGGAG 10364 || ||||| ||||| | ||| || || ||||| | | || |||||||||||| || || Sbjct 154405 GGTGTTGGGCAATCTTCAGGTACAGGCGGTAGGGTTCGTGTGTAATAGGAGAGGTTTGAA 154464 Query 10365 AAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATGGGAGGGCTGTCAATCAAA 10424 | |||||||||||| ||| | || || | |||||| | ||||||||||| |||||| Sbjct 154465 TACGCTTCCCAGCTTTTGTAACCATAATCTGAATTGTAGGTAGGAGGGCTGTCGATCAAA 154524 Query 10425 T 10425 | Sbjct 154525 T 154525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 705657577265600