Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5979 114 3e-20
seq246 86.0 2e-11
>seq5979
Length=32993
Score = 114 bits (126), Expect = 3e-20
Identities = 117/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||| |||| || ||||||| ||||| || || ||||| |||
Sbjct 3481 GCCCAGCAGCTGTGGTACGCCGTCATCGAGTCGCAGACGGAGACGGGCACGCCCTACATG 3540
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
||||||| || | |||||||||||| |||||||||| |||| || || || ||
Sbjct 3541 CTGTACAAGGACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGC 3600
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || |||||||| | || ||||||
Sbjct 3601 AGCAACCTGTGCACCGAGATCGTGGAGTACACC 3633
Score = 86.0 bits (94), Expect = 2e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809
|| |||||||||||||| || || || |||||||| || |||||||||| | | || ||
Sbjct 5600 GCCCCCATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATGGAGCCC 5659
Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGT 364859
| || ||||| || || | ||||| || ||||||||||| || | |||
Sbjct 5660 TACACCAGCAACCTGTACACCCGCCGCGTGCTTTCCGGAGAGTTCCAGGT 5709
>seq246
Length=269734
Score = 86.0 bits (94), Expect = 2e-11
Identities = 118/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 111390 ACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGT 111449
|||||| | || || || | | ||| ||| ||||||||||||| ||||||||| |||
Sbjct 47529 ACAAATTCCAAAGAGCTGTCGGAGAAAGGTGTGAAAATTTGGGATGCAAATGGATCCCGT 47470
Query 111450 GACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTAC 111509
|| ||| | || ||| || ||| || ||||| || | || || ||||||
Sbjct 47469 GATTTTTTGGACAAGAGTGGATTTACTAACAGGGAGGAAGGGGACTTGGGCCCTGTTTAC 47410
Query 111510 GGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554
|| || || ||| | ||||||||||| || |||||| |||||||
Sbjct 47409 GGTTTCCAGTGGAGACACTTTGGTGCTGAATACAAAGACATGCAC 47365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1297947395164680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |