Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq11470 122 7e-23
seq1314 113 4e-20
>seq11470
Length=16648
Score = 122 bits (134), Expect = 7e-23
Identities = 151/205 (74%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| ||||||||||| || ||||||||||||| || ||| | | || |||| ||
Sbjct 14219 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGC 14160
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | || |||| ||| ||||| || | |||||||||||| || ||
Sbjct 14159 TTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTG 14100
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| |||||| | | | ||||||| ||||||| |||| ||||||||| || || |
Sbjct 14099 GC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTG 14042
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
| || || ||||| || ||||||||
Sbjct 14041 TGAGGGTCTTGACGAAGATCTGCAT 14017
Score = 82.4 bits (90), Expect = 6e-11
Identities = 105/143 (73%), Gaps = 4/143 (3%)
Strand=Plus/Minus
Query 16799 GCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCT 16856
||| | || |||| ||| ||||| || | |||||||||||| || || || ||
Sbjct 13705 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGC--CT 13648
Query 16857 TCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCG 16916
|||| | | | ||||||| ||||||| |||| |||||| || || || ||||| |
Sbjct 13647 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATAGTCTTGCCAGTCAGTG 13588
Query 16917 TTTTGACAAAAATCTGCATTTTG 16939
| |||||||| ||||||||||||
Sbjct 13587 TCTTGACAAAGATCTGCATTTTG 13565
>seq1314
Length=105107
Score = 113 bits (124), Expect = 4e-20
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
|||||||| || | ||| |||| || || || |||||||| || |||||||||||||
Sbjct 43834 CCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGA 43893
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| | | || |||| || || || ||| | || |||| ||| ||||| |||
Sbjct 43894 CAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGG 43953
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| ||| || ||||| || || || ||| || | | | ||||| | |||||||
Sbjct 43954 AATGCCTTCCTTGTCCTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGCTCC 44011
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || || ||||| || || ||||| ||||||||
Sbjct 44012 ACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44061
Score = 113 bits (124), Expect = 4e-20
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
|||||||| || | ||| |||| || || || |||||||| || |||||||||||||
Sbjct 44062 CCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGA 44121
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| | | || |||| || || || ||| | || |||| ||| ||||| |||
Sbjct 44122 CAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGG 44181
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| ||| || ||||| || || || ||| || | | | ||||| | |||||||
Sbjct 44182 AATGCCTTCCTTGTCCTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGCTCC 44239
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || || ||||| || || ||||| ||||||||
Sbjct 44240 ACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44289
Score = 107 bits (118), Expect = 2e-18
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
|||||||| || | ||| |||| || || || |||||||| || |||||||||||||
Sbjct 44290 CCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGA 44349
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| | | || |||| || || || ||| | || |||| ||| ||||| |||
Sbjct 44350 CAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGG 44409
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| ||| || ||||| || || || ||| || | | | ||||| | |||||||
Sbjct 44410 AATGCCTTCCTTGTCCTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGCTCC 44467
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||| ||||| || || ||||| ||||| || || ||||||||
Sbjct 44468 ACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 44517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403489692382600
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