Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq11470 178 2e-39
seq1314 170 4e-37
seq14568 93.3 8e-14
seq313 93.3 8e-14
seq2812 84.2 4e-11
>seq11470
Length=16648
Score = 178 bits (196), Expect = 2e-39
Identities = 165/207 (80%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 68256 AAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAAC 68315
||||| || |||||||| || |||||||| || ||||| || || | |||||||| | |
Sbjct 14222 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGC 14163
Query 68316 TGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATC 68375
||||| ||||| || || || || || ||||| || |||||||| || ||||| || |||
Sbjct 14162 TGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATC 14103
Query 68376 TTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGTGATGGTTTTTCC 68434
|| ||||| ||| ||| |||||||| |||| || || |||| ||||||||| || ||
Sbjct 14102 TTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 14044
Query 68435 CGTGAGGGTCTTGACGAATATCTGCAT 68461
||||||||||||||||| ||||||||
Sbjct 14043 TGTGAGGGTCTTGACGAAGATCTGCAT 14017
>seq1314
Length=105107
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | ||| |||| |||| ||| || || ||||| || |||||||| || |||||
Sbjct 43835 CCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 43894
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || || || || || || || ||||| || |||
Sbjct 43895 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 43954
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| |||||||| ||| |||||||| | || ||
Sbjct 43955 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACC 44014
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||||||| || || || |||||||| || || ||||||||
Sbjct 44015 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44061
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | ||| |||| |||| ||| || || ||||| || |||||||| || |||||
Sbjct 44063 CCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 44122
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || || || || || || || ||||| || |||
Sbjct 44123 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44182
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| |||||||| ||| |||||||| | || ||
Sbjct 44183 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACC 44242
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||||||| || || || |||||||| || || ||||||||
Sbjct 44243 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44289
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | ||| |||| |||| ||| || || ||||| || |||||||| || |||||
Sbjct 44291 CCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 44350
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || || || || || || || ||||| || |||
Sbjct 44351 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44410
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| |||||||| ||| |||||||| | || ||
Sbjct 44411 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACC 44470
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||| ||||| || || || ||||| || ||||| ||||||||
Sbjct 44471 TCCAGGGTAATGGTCTTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 44517
>seq14568
Length=18141
Score = 93.3 bits (102), Expect = 8e-14
Identities = 108/145 (74%), Gaps = 3/145 (2%)
Strand=Plus/Plus
Query 9889 GCATTTAGAAGTCTGCGTCAATTGCAAACACGTTGTCGTCGGCATT---CATGACGCCCG 9945
|| |||| ||||| || || | | || |||||| | || || |||||| |||
Sbjct 6005 GCTTTTAAAAGTCAGCTTCCAGAGTGAAGGTGTTGTCCACAGCCTTGGACATGACCCCCA 6064
Query 9946 CCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGA 10005
||||||||||||| || || ||| |||||||||| ||| ||||| ||||| |||
Sbjct 6065 TCTTCTGGTACTCCCCCACACGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGGGAGATGT 6124
Query 10006 GCTCCATGAAGTCAAAGGGGTTCTC 10030
|||||||||||| |||||||||||
Sbjct 6125 TCTCCATGAAGTCGAAGGGGTTCTC 6149
>seq313
Length=533116
Score = 93.3 bits (102), Expect = 8e-14
Identities = 85/105 (81%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416
|||||||| ||||||||||||||||| || |||||||||||| ||| | ||| || ||
Sbjct 79882 CCTTCCTTATCTTGAATCTTTGCCTTCACATTCTCGATGGTGTC-GCTGGGTTCCACCTC 79940
Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| |||||||||||| || || | || || || |||||||||||
Sbjct 79941 GAGGGTGATGGTTTTCCCTGTCAACGTTTTCACAAATATCTGCAT 79985
>seq2812
Length=62591
Score = 84.2 bits (92), Expect = 4e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417
|||||||| || || ||||| ||||| || |||||||||||| | ||| || ||
Sbjct 32247 CCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGTTCCACCTCG 32188
Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||||||||||||| || | ||| || ||||| ||||||||
Sbjct 32187 AGGGTGATGGTTTTTCCTGTCAAGGTTTTCACGAAGATCTGCAT 32144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 917892824552800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |