Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq50814 156 8e-33
seq5979 156 8e-33
seq14568 118 2e-21
seq896 105 1e-17
seq7729 100 5e-16
>seq50814
Length=1495
Score = 156 bits (172), Expect = 8e-33
Identities = 169/219 (77%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 244317 GCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG-GCC 244375
||| ||||||||||||||| |||| |||||||| |||||| |||| || | | |||
Sbjct 625 GCACCCCCTTGCTGACGGGCGAGCCCGCGTAGGTCTCGTAGGGTCCGT-GCTCGGCCGCC 567
Query 244376 AGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATG 244435
|||| ||||| | || |||||||||||||||||||||||||||||| |||| | |
Sbjct 566 AGCTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGTCTCGAAGATCTGGCTGTTGA-G 508
Query 244436 TCGC-GGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCC 244494
|| |||||| || |||||||| || ||||| |||||| |||||||||| ||
Sbjct 507 CAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCATCAGGATGAAGGCGTCGGCCAGGCC 448
Query 244495 CTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533
|||||| ||||| ||||| || ||||| ||| |||||
Sbjct 447 CTGCACCCCGATCCCGATCGGCCTGTGCAACTTATTGGA 409
>seq5979
Length=32993
Score = 156 bits (172), Expect = 8e-33
Identities = 169/219 (77%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 244317 GCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG-GCC 244375
||| ||||||||||||||| |||| |||||||| |||||| |||| || | | |||
Sbjct 4785 GCACCCCCTTGCTGACGGGCGAGCCCGCGTAGGTCTCGTAGGGTCCGT-GCTCGGCCGCC 4727
Query 244376 AGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATG 244435
|||| ||||| | || |||||||||||||||||||||||||||||| |||| | |
Sbjct 4726 AGCTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGTCTCGAAGATCTGGCTGTTGA-G 4668
Query 244436 TCGC-GGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCC 244494
|| |||||| || |||||||| || ||||| |||||| |||||||||| ||
Sbjct 4667 CAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCATCAGGATGAAGGCGTCGGCCAGGCC 4608
Query 244495 CTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533
|||||| ||||| ||||| || ||||| ||| |||||
Sbjct 4607 CTGCACCCCGATCCCGATCGGCCTGTGCAACTTATTGGA 4569
Score = 145 bits (160), Expect = 1e-29
Identities = 157/208 (75%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 244701 CGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGA 244760
|| ||||||| ||| | ||||||||| || ||||||||||| ||||| ||||||||||
Sbjct 3652 CGCCCACCTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGA 3593
Query 244761 TGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGG 244820
|||||||||||| ||| || ||| |||| |||||||||||||||||| |||||| |||
Sbjct 3592 TGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGG 3533
Query 244821 GCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCG 244880
|| || ||||| ||| | ||| |||| || ||| || | | ||||| |||
Sbjct 3532 GCGTGCCCGTCTCCGTCTGCGACTCGATGACGGCGTACCACAGCTGCTGGGCCTTCACCA 3473
Query 244881 TCCTGCGAGCCTTGCCCTCTGCCTCGTA 244908
|| ||||||||||| ||||||
Sbjct 3472 CCCGCTTGGCCTTGCCCTCCTGCTCGTA 3445
Score = 138 bits (152), Expect = 2e-27
Identities = 121/151 (80%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062
||||||| ||||||||||||||||||||||||||| | |||||| || | | || ||||
Sbjct 2773 ACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCCGCTGC 2714
Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122
|| ||| || ||||||||| ||||||||| || || |||| ||| | ||||||||||
Sbjct 2713 TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGC 2654
Query 245123 TCCATGTAGACAGCGAGGGCGCCGGGCCGCT 245153
|||| ||| | |||| || ||||||| ||
Sbjct 2653 TCCAGGTACATGGCGAATGCCCCGGGCCTCT 2623
Score = 123 bits (136), Expect = 5e-23
Identities = 116/147 (79%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154
||||||| |||||||| || ||||||||||| ||| ||||||||| || ||||| |
Sbjct 5711 CCACCTGGAACTCTCCGGAAAGCACGCGGCGGGTGTACAGGTTGCTGGTGTAGGGCTCCA 5652
Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214
|| ||| |||||||||| ||||| || ||| || || |||||||| | || |||||
Sbjct 5651 TGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATGGGGGCCAGCAGCA 5592
Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGA 244241
| ||||||||||| ||||| ||||||
Sbjct 5591 GGCTGTTCCTCACCCCGTG--TCTGGA 5567
Score = 87.8 bits (96), Expect = 3e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933
|| ||| ||||||||||||||||||| ||||| | | || || |||||||| ||||||
Sbjct 6379 GATGTTCAGGGACTGGCTCTGGTCGATGAAGGCCCCGCGGTCGGCGGCCATCTTGATGAT 6320
Query 243934 GTCCTTCTGAGATATCTCATACGCCGTCTTGTA 243966
| ||||||||| ||||| || | ||||||||
Sbjct 6319 GGTCTTCTGAGAGATCTCCCACACGGTCTTGTA 6287
>seq14568
Length=18141
Score = 118 bits (130), Expect = 2e-21
Identities = 159/221 (72%), Gaps = 3/221 (1%)
Strand=Plus/Minus
Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCT 42888
|||| ||||| | |||||||||||||| ||||| |||||||| |||| || |
Sbjct 6707 AGGGCCTGCACTGTGACTTTGCCTGCCTGATGTTC---AGCCACCTGCGGCAGCGCCCGT 6651
Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
| ||| |||||| || | |||| ||| ||||||| |||||| |||||||||| |
Sbjct 6650 CAGAGGCGCGGGTGAAGGAGGTGATCATGGACGCCGTGGCCATCGAGCAGGAGTTCCTGA 6591
Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008
| | |||||||||| |||| |||| |||||| || |||||| | |||||||
Sbjct 6590 CCGGGGCGCTGCCCGTCAGCCTGATCGGGATGAACTGCGCGCTCATGAAGAGCTACATCC 6531
Query 43009 AGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC 43049
||| || ||||||| || ||| | || |||| |||||
Sbjct 6530 AGTTTGTGGCCGACCGCCTGCTGCTCGAGCTGGGCTTCAGC 6490
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
|||||||||||| |||||||||||||| ||||||| ||||||||||| || ||||||||
Sbjct 6144 CCCCTTCGACTTCATGGAGAACATCTCCCTGGAGGGGAAGACCAACTTCTTTGAGAAGCG 6085
Query 43130 CGTCGCCGACTACCAG 43145
|| | || ||||||
Sbjct 6084 TGTGGGGGAGTACCAG 6069
>seq896
Length=134646
Score = 105 bits (116), Expect = 1e-17
Identities = 101/127 (80%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765
||||||||||| | || || || || ||||||||||| || | || || ||||||||||
Sbjct 20717 TGGTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCT 20658
Query 42766 GGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
|| | ||| || ||| ||| |||||| || ||||| ||||| ||||| || ||||||||
Sbjct 20657 GGTTGAAGAAG-AGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGATCAGCAGA 20599
Query 42825 GACGAGG 42831
|| ||||
Sbjct 20598 GATGAGG 20592
>seq7729
Length=25563
Score = 100 bits (110), Expect = 5e-16
Identities = 106/137 (77%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| ||||| | || |||||| | || || ||||| || |||||||| || |||| ||
Sbjct 16226 GGGGAGAGAATTGTGGCCTTTGCTGCGGTGGAGGGGATTTTCTTCTCTGGGTCCTTTGCA 16285
Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
|||||| |||| | ||| ||| ||| || |||||||||||||||| ||| || || ||
Sbjct 16286 GCCATCTACTGGTTAAAGAAGAGAGGCCTC-ATGCCCGGACTCACCTACTCCAATGAGCT 16344
Query 42815 CATCAGCAGGGACGAGG 42831
||||||||| || ||||
Sbjct 16345 CATCAGCAGAGATGAGG 16361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 940517695342400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |