Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5979 122 9e-23 >seq5979 Length=32993 Score = 122 bits (134), Expect = 9e-23 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 95073 CAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCA 95132 || |||||| |||| ||| ||||| ||||||||||||||||||||||||| || || Sbjct 5569 CAGACACGGGGTGAGGAACAGCCTGCTGCTGGCCCCCATGCCCACGGCCTCCACCGCCCA 5628 Query 95133 GATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGT 95192 |||||| |||||||||||||| | || |||| |||| |||| |||||| | | || || Sbjct 5629 GATCCTGGGCAACAACGAGTCCATGGAGCCCTACACCAGCAACCTGTACACCCGCCGCGT 5688 Query 95193 GCTCGCCGGGGAATTCC 95209 ||| |||| || |||| Sbjct 5689 GCTTTCCGGAGAGTTCC 5705 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 94421 AGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTAC 94480 |||||||||||| | ||| || | || | |||||||| | || | || | Sbjct 3455 AGGGCAAGGCCAAGCGGGTGGTGAAGGCCCAGCAGCTGTGGTACGCCGTCATCGAGTCGC 3514 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 || ||||||||| ||||||||||| ||| ||||||| | |||| |||| ||||| Sbjct 3515 AGACGGAGACGGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACCGCAAGAGCAACC 3574 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATAC 94598 ||||| |||| || |||||| || || |||||||||||||| || ||||| || Sbjct 3575 AGCAGAACCTGGGCACCATCAAGTGCAGCAACCTGTGCACCGAGATCGTGGAGTACAC 3632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492721178890400