Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq5979 104 2e-17 seq1314 96.9 3e-15 seq50814 82.4 8e-11 seq11470 82.4 8e-11 >seq5979 Length=32993 Score = 104 bits (114), Expect = 2e-17 Identities = 90/112 (80%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699 |||||| ||||||||||| ||| ||||||||||| || ||| ||||| || ||||| | Sbjct 3631 TGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGT 3572 Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 153751 |||| ||||| ||||| ||||| ||| | |||||||| || ||| ||||| Sbjct 3571 TGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCCGTCTC 3520 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 153303 GCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTG 153362 ||||| |||||||| ||||| || ||| | ||||| ||||| ||| ||| || | ||| Sbjct 4729 GCCAGCTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGTCTCGAAGATCTGGCTGTTG 4670 Query 153363 AGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGA 153422 || | || || ||||||| | || | ||||| ||| | |||||||||||||| Sbjct 4669 AGCAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCATCAGGATGAAGGCGTCGGCCAGG 4610 Query 153423 CCCTGGATACCGACGCCGATGGG 153445 ||||| | |||| ||||| || Sbjct 4609 CCCTGCACCCCGATCCCGATCGG 4587 >seq1314 Length=105107 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| || || || || || || || || || | Sbjct 44322 TTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAG 44381 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | ||| ||||| ||||| || ||||| ||||| ||| || || | Sbjct 44382 CAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA 44441 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | |||||| | | ||||||||| | || | || || |||||||| |||| Sbjct 44442 CATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTTT 44501 Query 138599 TTACAAAAATCTGCATGG 138616 | || || |||||||||| Sbjct 44502 TCACGAAGATCTGCATGG 44519 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| || || || || || || || || || | Sbjct 43866 TTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAG 43925 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | ||| ||||| ||||| || ||||| ||||| ||| || || | Sbjct 43926 CAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA 43985 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | |||||| | | ||||||||| | || | || || |||||||| || | Sbjct 43986 CATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCT 44045 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 44046 TCACAAAGATCTGCAT 44061 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| || || || || || || || || || | Sbjct 44094 TTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAG 44153 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | ||| ||||| ||||| || ||||| ||||| ||| || || | Sbjct 44154 CAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA 44213 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | |||||| | | ||||||||| | || | || || |||||||| || | Sbjct 44214 CATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCT 44273 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 44274 TCACAAAGATCTGCAT 44289 >seq50814 Length=1495 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 153303 GCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTG 153362 ||||| |||||||| ||||| || ||| | ||||| ||||| ||| ||| || | ||| Sbjct 569 GCCAGCTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGTCTCGAAGATCTGGCTGTTG 510 Query 153363 AGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGA 153422 || | || || ||||||| | || | ||||| ||| | |||||||||||||| Sbjct 509 AGCAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCATCAGGATGAAGGCGTCGGCCAGG 450 Query 153423 CCCTGGATACCGACGCCGATGGG 153445 ||||| | |||| ||||| || Sbjct 449 CCCTGCACCCCGATCCCGATCGG 427 >seq11470 Length=16648 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || || || || || || |||| | Sbjct 14210 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCA 14151 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || |||||||| ||| || || | Sbjct 14150 AAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCACG 14091 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || || || || || || Sbjct 14090 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 14031 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 14030 ACGAAGATCTGCATG 14016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494254150132800