Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5979 95.1 1e-14 >seq5979 Length=32993 Score = 95.1 bits (104), Expect = 1e-14 Identities = 92/117 (79%), Gaps = 6/117 (5%) Strand=Plus/Minus Query 146664 CTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCC 146723 |||||||||| | |||| ||| ||||||| ||| |||||||||||||||||| |||| Sbjct 3645 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 3586 Query 146724 CAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCCTTGTAGAGCATGTACGG 146777 || || | ||||| || ||| |||||||| ||||||||| |||||||| || Sbjct 3585 CAGGTTCTGCTGGTTGCT---CTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGG 3532 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 146063 GGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACG 146122 || || ||||||| ||||| |||| || ||||| | |||| |||||||||| | | Sbjct 5717 GGCTGCCCACCTGGAACTCTCCGGAAAGCACGCGGCGGGTGTACAGGTTGCTGGTGTAGG 5658 Query 146123 GCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCA 146182 |||| | ||||||||||| || || ||||| || || | || || |||||| |||| Sbjct 5657 GCTCCATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATGGGGGCCA 5598 Query 146183 CCAGCAAAGAGTTTCTCACGCCGTGTCT 146210 ||||| ||| ||||| |||||||| Sbjct 5597 GCAGCAGGCTGTTCCTCACCCCGTGTCT 5570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473576567137600