Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq232 118 2e-21
seq53 104 3e-17
seq370 87.8 3e-12
>seq232
Length=316446
Score = 118 bits (130), Expect = 2e-21
Identities = 184/257 (72%), Gaps = 6/257 (2%)
Strand=Plus/Plus
Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTA-ATTGGGCTATTCCGTGCTTGATGAGGAT 9494
|| |||||||| | ||||| || ||| | | |||| | || || || | ||| |
Sbjct 152568 CCTGCAATCTGCTTGGTGAAGGACTCAGCCAGATTGTGG-ATGCCATGGTCCGTGACTAC 152626
Query 9495 GGAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATC 9554
|||||||||| | | || || | ||| | || | ||| ||| | || ||||
Sbjct 152627 GGAATTGTTGAAGAGAAACTGCTTGTAGCTGTAGACCTGGTCCTGGATGTGGAAGGCATC 152686
Query 9555 AGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTA 9614
||||| ||| | |||||| |||||||||| |||||||| | || || |||||||||||
Sbjct 152687 AGGCATCAGCGGGTGCCAGTGGTAGAGGGTGTTGAACTCAGACGAGATGCGGTTCTGGTA 152746
Query 9615 CTGAAAG-GC-GGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCG 9672
||| ||| || ||| |||||| | ||| ||||| || | |||| |||||||||||||
Sbjct 152747 CTGGAAGCGCTGGT--TGAACAGCAGCTCGGGGTCGAACTTCAGCTTGAAGTGGTACCCG 152804
Query 9673 CTGAGTTGCTGGACATA 9689
|| || ||||| || ||
Sbjct 152805 CTCAGATGCTGCACGTA 152821
>seq53
Length=402108
Score = 104 bits (114), Expect = 3e-17
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 9726 GATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAG 9785
||| || || ||||| ||||| | |||||||| |||| || ||||| ||| || ||
Sbjct 395609 GATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGCTCGCTCTTCAG 395668
Query 9786 AACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGG 9845
| |||||||| | |||||| || | |||||| ||||||||||||||||| | |||||
Sbjct 395669 GATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATCATGAGGCCCGG 395728
Query 9846 CACTAAACCAAACACTTCATTCCCCACTGCAA 9877
||| | || || | || | |||||| ||||
Sbjct 395729 CACCAGGCCGAAGGCCTCGTGCCCCACGGCAA 395760
Score = 93.3 bits (102), Expect = 6e-14
Identities = 175/255 (69%), Gaps = 2/255 (1%)
Strand=Plus/Plus
Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495
||||| ||||| | || || || || | | | | | || ||||||| |||| |
Sbjct 395092 CCGGCGATCTGCTTGGTAAAAGACTCCGCCAGGTTGCCAATGCCGTGCTCCATGACCAGC 395151
Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555
|| |||||| | | ||| || ||| ||||||| | | | ||| | || ||
Sbjct 395152 GAGTTGTTGAACATGAACTGCGGGTAGCCATACTCCTGGCCCTGGATGTGGAACGAGTCG 395211
Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615
|||| | | |||||| ||||||||| ||||||||||| || || ||||||||||||
Sbjct 395212 GGCATTAACGGGTGCCAGTGGTAGAGGGCATTGAACTCGGAGGCAATGCGGTTCTGGTAC 395271
Query 9616 T-GAAAGGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGCT 9674
| |||| || | |||||| | ||||||||| || | |||| ||| || || || ||
Sbjct 395272 TGGAAACGC-TCATTGAACAGCAGCTCCGGGTCGAACTTCAGCTTGAAATGATAGCCACT 395330
Query 9675 GAGTTGCTGGACATA 9689
|| ||||| || ||
Sbjct 395331 CAGGTGCTGCACGTA 395345
>seq370
Length=220803
Score = 87.8 bits (96), Expect = 3e-12
Identities = 170/251 (68%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 9718 CCGGTAATGATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCG 9777
||| | |||||||| || | ||| ||| ||| |||||| || |||| ||||| ||
Sbjct 17881 CCGATGATGATTAGCCGTGCGGTCTGATACAGCTGCTCATCGTCCCAGGTGGGGTGCTCC 17822
Query 9778 TGTTTGAGAACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATT 9837
|| || || || ||||| | |||||| || | |||||| | |||||||||||| |
Sbjct 17821 GCCTTCAGGACGTCACAGACGCGGTTGTGCTCACGCAGCCACAGGGTGGCGTACATGGTG 17762
Query 9838 AAACCCGGCACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACT 9897
| || |||| || |||||| || | || | ||| | |||| | || || || ||
Sbjct 17761 AGGCCTGGCAGTAGCCCAAACCTGTCCTCGCCAATTGCCAGGCGCTGCTCTTCTGGGACG 17702
Query 9898 TCGGGCGCATACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCG 9957
| || | ||| | ||| ||| | || ||| || || || || || | || |||
Sbjct 17701 TGCGGGGGATAGATCATGGACACATCTGTTTCTGCTACCGTCGGAGGGTAAACCTCTCCG 17642
Query 9958 TCAATAACCTG 9968
||||| |||||
Sbjct 17641 TCAATCACCTG 17631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 720799253716000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |