Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq232 118 2e-21 seq53 104 3e-17 seq370 87.8 3e-12 >seq232 Length=316446 Score = 118 bits (130), Expect = 2e-21 Identities = 184/257 (72%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTA-ATTGGGCTATTCCGTGCTTGATGAGGAT 9494 || |||||||| | ||||| || ||| | | |||| | || || || | ||| | Sbjct 152568 CCTGCAATCTGCTTGGTGAAGGACTCAGCCAGATTGTGG-ATGCCATGGTCCGTGACTAC 152626 Query 9495 GGAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATC 9554 |||||||||| | | || || | ||| | || | ||| ||| | || |||| Sbjct 152627 GGAATTGTTGAAGAGAAACTGCTTGTAGCTGTAGACCTGGTCCTGGATGTGGAAGGCATC 152686 Query 9555 AGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTA 9614 ||||| ||| | |||||| |||||||||| |||||||| | || || ||||||||||| Sbjct 152687 AGGCATCAGCGGGTGCCAGTGGTAGAGGGTGTTGAACTCAGACGAGATGCGGTTCTGGTA 152746 Query 9615 CTGAAAG-GC-GGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCG 9672 ||| ||| || ||| |||||| | ||| ||||| || | |||| ||||||||||||| Sbjct 152747 CTGGAAGCGCTGGT--TGAACAGCAGCTCGGGGTCGAACTTCAGCTTGAAGTGGTACCCG 152804 Query 9673 CTGAGTTGCTGGACATA 9689 || || ||||| || || Sbjct 152805 CTCAGATGCTGCACGTA 152821 >seq53 Length=402108 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 9726 GATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAG 9785 ||| || || ||||| ||||| | |||||||| |||| || ||||| ||| || || Sbjct 395609 GATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGCTCGCTCTTCAG 395668 Query 9786 AACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGG 9845 | |||||||| | |||||| || | |||||| ||||||||||||||||| | ||||| Sbjct 395669 GATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATCATGAGGCCCGG 395728 Query 9846 CACTAAACCAAACACTTCATTCCCCACTGCAA 9877 ||| | || || | || | |||||| |||| Sbjct 395729 CACCAGGCCGAAGGCCTCGTGCCCCACGGCAA 395760 Score = 93.3 bits (102), Expect = 6e-14 Identities = 175/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 ||||| ||||| | || || || || | | | | | || ||||||| |||| | Sbjct 395092 CCGGCGATCTGCTTGGTAAAAGACTCCGCCAGGTTGCCAATGCCGTGCTCCATGACCAGC 395151 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 || |||||| | | ||| || ||| ||||||| | | | ||| | || || Sbjct 395152 GAGTTGTTGAACATGAACTGCGGGTAGCCATACTCCTGGCCCTGGATGTGGAACGAGTCG 395211 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 |||| | | |||||| ||||||||| ||||||||||| || || |||||||||||| Sbjct 395212 GGCATTAACGGGTGCCAGTGGTAGAGGGCATTGAACTCGGAGGCAATGCGGTTCTGGTAC 395271 Query 9616 T-GAAAGGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGCT 9674 | |||| || | |||||| | ||||||||| || | |||| ||| || || || || Sbjct 395272 TGGAAACGC-TCATTGAACAGCAGCTCCGGGTCGAACTTCAGCTTGAAATGATAGCCACT 395330 Query 9675 GAGTTGCTGGACATA 9689 || ||||| || || Sbjct 395331 CAGGTGCTGCACGTA 395345 >seq370 Length=220803 Score = 87.8 bits (96), Expect = 3e-12 Identities = 170/251 (68%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 9718 CCGGTAATGATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCG 9777 ||| | |||||||| || | ||| ||| ||| |||||| || |||| ||||| || Sbjct 17881 CCGATGATGATTAGCCGTGCGGTCTGATACAGCTGCTCATCGTCCCAGGTGGGGTGCTCC 17822 Query 9778 TGTTTGAGAACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATT 9837 || || || || ||||| | |||||| || | |||||| | |||||||||||| | Sbjct 17821 GCCTTCAGGACGTCACAGACGCGGTTGTGCTCACGCAGCCACAGGGTGGCGTACATGGTG 17762 Query 9838 AAACCCGGCACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACT 9897 | || |||| || |||||| || | || | ||| | |||| | || || || || Sbjct 17761 AGGCCTGGCAGTAGCCCAAACCTGTCCTCGCCAATTGCCAGGCGCTGCTCTTCTGGGACG 17702 Query 9898 TCGGGCGCATACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCG 9957 | || | ||| | ||| ||| | || ||| || || || || || | || ||| Sbjct 17701 TGCGGGGGATAGATCATGGACACATCTGTTTCTGCTACCGTCGGAGGGTAAACCTCTCCG 17642 Query 9958 TCAATAACCTG 9968 ||||| ||||| Sbjct 17641 TCAATCACCTG 17631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720799253716000