Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5979 86.0 8e-12 >seq5979 Length=32993 Score = 86.0 bits (94), Expect = 8e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 115908 GTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGT 115967 |||| | ||||| ||||| | | |||| ||||| |||| ||| ||||| |||||||| || Sbjct 5671 GTTGCTGGTGTAGGGCTCCATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGT 5612 Query 115968 GGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||||||| |||| || |||||||| Sbjct 5611 GGGCATGGGGGCCAGCAGCAGGCTGTT 5585 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 116751 CTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG 116810 ||| |||| ||||||||||||||| ||||||||||| || |||||||||| ||| || Sbjct 2777 CTCCACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCCG 2718 Query 116811 -AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 116869 ||| || | ||||| || || || ||||| || || | ||| || ||||| Sbjct 2717 CTGCTCCTCCTTCCCCGTG-TTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCC 2659 Query 116870 ACGGTTCCAGGTACACCGCGATTGACCC 116897 | || |||||||||| |||| || ||| Sbjct 2658 AGGGCTCCAGGTACATGGCGAATGCCCC 2631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611024489738400