Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq11470 141 9e-29 seq1314 122 9e-23 seq14568 114 1e-20 seq7729 82.4 8e-11 seq896 82.4 8e-11 >seq11470 Length=16648 Score = 141 bits (156), Expect = 9e-29 Identities = 157/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| ||| | Sbjct 14017 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 14076 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||||||||| |||||| | ||||| Sbjct 14077 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCA 14135 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 14136 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 14195 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTT 38449 |||||| ||||| | || ||||| || Sbjct 14196 CATCCAGAAGGAGTCCACCCTGCACTT 14222 >seq1314 Length=105107 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| ||||| ||| | || || ||| ||| Sbjct 44517 ATGCAGATCTTCGTGAAAACCCTGACTGGCAAGACCATTACCCTGGAGGTGGAGCCCAGT 44458 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| || || ||||| | ||||| Sbjct 44457 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 44398 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || || |||||||| || | |||||||| |||||||||| Sbjct 44397 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 44338 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || |||| |||||| | ||||| || Sbjct 44337 ATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 44291 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 44061 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 44002 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| || || ||||| | ||||| Sbjct 44001 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 43942 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || || |||||||| || | |||||||| |||||||||| Sbjct 43941 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 43882 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || |||| |||||| | ||||| || Sbjct 43881 ATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 43835 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 44289 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 44230 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| || || ||||| | ||||| Sbjct 44229 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 44170 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || || |||||||| || | |||||||| |||||||||| Sbjct 44169 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 44110 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || |||| |||||| | ||||| || Sbjct 44109 ATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 44063 >seq14568 Length=18141 Score = 114 bits (126), Expect = 1e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 ||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 8217 ACCAGGTTCTCGTTGACGATGCCGTCGCTGGCGGCGAAGAAGGCCAGCACGTGGGAGATG 8276 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 || |||||| | | |||| | |||||| | || |||||||||||||||| ||| Sbjct 8277 AAGAAGCGCTCCTCCTGCTTCAGACCCTCCCAATGCTGCATGTCCTTGGACAGGTCAACC 8336 Query 133399 T 133399 | Sbjct 8337 T 8337 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 ||| |||| ||||| | ||||||||| |||| |||||| | |||| |||| || Sbjct 6499 CAGCTCGAGCAGCAGGCGGTCGGCCACAAACTGGATGTAGCTCTTCATGAGCGCGCAGTT 6558 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830 | || | ||| | || |||||||| |||| || || ||||||||||| || || Sbjct 6559 CATCCCGATCAGGCTGACGGGCAGCGCCCCGGTCAGGAACTCCTGCTCGATGGCCACGGC 6618 Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACAT 132890 ||| ||| | ||| | || |||||| | ||| || ||| || || ||||||| Sbjct 6619 GTCCATGATCACCTCCTTCACCCGCGCCTCTGACGGGCGCTGCCGCAGGTGGCTGAACAT 6678 Query 132891 CAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 || ||| |||||||| || |||| ||||| Sbjct 6679 CAGGCAGGCAAAGTCACAGTGCAGGCCCT 6707 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 ||||||| | | ||||| |||||| ||| |||| ||| ||||||||||| ||||| | Sbjct 7014 CCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTCAGGCCCGGCATGAGGCCTCGTTTCT 7073 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||| || ||||| || || || || || |||| || || || || ||||| | Sbjct 7074 TCAGCCAGAAGATGGCAGCAAACGAACCGGAGAAAAAGATCCCTTCCACAGCTGCGAATG 7133 Query 133037 CCACCAGGCGCTCGCC 133052 |||||| ||||| || Sbjct 7134 CCACCACACGCTCACC 7149 >seq7729 Length=25563 Score = 82.4 bits (90), Expect = 8e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||| |||||| | ||||| || ||||| || ||||||||| ||| || || Sbjct 14865 GTAGGTGTTGATGAGCATGCCGTACATCTCAGAGTGGACATTCTCCATGAGGATCTGGAA 14806 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGA 133266 ||||||||| |||| ||||| ||||||||||||||| Sbjct 14805 CCCGTAAAAGGACCGTGCCTCTGGGACCTGCACTTCTTGA 14766 >seq896 Length=134646 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAA 133455 ||||| || | ||||| || || ||||| |||||||||||||| ||| ||||| Sbjct 22382 ACCTCTTCAGCAGTCCAGAAAGAAGCCTCAGCTTTTTTGTACATTTGCCAGATGTCATGG 22441 Query 133456 TATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508 |||| ||||||||||| || || |||||||| || || | ||||| ||||| Sbjct 22442 TATTTGATGGGAAAAATGACGAAACGGCGGGGATTGTCTCTTAACAGTGGCTC 22494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498148725721600