Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq3072 100 2e-15
seq9631 95.1 9e-14
>seq3072
Length=63529
Score = 100 bits (110), Expect = 2e-15
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236
||||| |||| ||||||||||||||||||||| || |||| ||||||||| ||||| | |
Sbjct 57991 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAAAACATTTAGACCTGAA 57932
Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296
||| | || || || || || ||||| | || ||||| || || || || || || ||
Sbjct 57931 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 57872
Query 518297 ATAACGGC 518304
| ||| ||
Sbjct 57871 ACAACAGC 57864
Score = 96.9 bits (106), Expect = 3e-14
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236
||||| |||| ||||||||||||||||||||| || |||| || |||||| ||||| | |
Sbjct 39692 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAGAACATTTAGACCTGAA 39751
Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296
||| | || || || || || ||||| | || ||||| || || || || || || ||
Sbjct 39752 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 39811
Query 518297 ATAACGGC 518304
| ||| ||
Sbjct 39812 ACAACAGC 39819
Score = 87.8 bits (96), Expect = 1e-11
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||| | || ||||| || || |||||| | |||| || || || |||||||||||
Sbjct 40434 CAAACACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTTGCAGCGTCTCCAATCAGCC 40493
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
| || || || || || | ||||| || || || | || || ||||| || ||||
Sbjct 40494 GCTCAGTATCGGTGAAAGCTACATAGCTGGGTGTGGTCCTGTTTCCCTGATCGTTGGCAA 40553
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| || |||||||| |||| || | |||||||| || | ||||| || | |||||
Sbjct 40554 TGATCTCAACTTTGCCATGCTGGAAGACACCTACGCAGGAGTAGGTTGTCCCCAGATCAA 40613
Query 518703 TACCAA 518708
||||||
Sbjct 40614 TACCAA 40619
Score = 87.8 bits (96), Expect = 1e-11
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||| | || ||||| || || |||||| | |||| || || || |||||||||||
Sbjct 57059 CAAACACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTTGCAGCGTCTCCAATCAGTC 57000
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
| || | || || |||| ||||| || || || | || || ||||| || ||||
Sbjct 56999 GCTCACTATCGGTGAATGCTACATAGCTGGGTGTGGTCCTGTTTCCCTGATCGTTGGCAA 56940
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| || |||||||| |||| || | |||||||| || | ||||| || | |||||
Sbjct 56939 TGATCTCAACTTTGCCATGCTGGAAGACACCTACGCAGGAGTAGGTTGTCCCCAGATCAA 56880
Query 518703 TACCAA 518708
||||||
Sbjct 56879 TACCAA 56874
>seq9631
Length=20267
Score = 95.1 bits (104), Expect = 9e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
||||| || | ||||| |||| ||||||||||| || || || |||||||| | |||
Sbjct 19761 TTTTTGTCCAAGCCATAGGCAATGGCAGCAGCAGTGGGCTCGTTTATAATTCTTAGTACA 19702
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| || |||| ||| | || ||||| || || ||||| | || |||||||| || ||
Sbjct 19701 TTTAGCCCAGAAATGGTCCCGGCATCCTTTGTAGCTTGCCGCTGAGAATCGTTGAAGTAA 19642
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
|| || ||||| | ||| ||||
Sbjct 19641 GCTGGTACAGTTACAACAGCAT 19620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3764757354800440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |