Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq9631 123 2e-22 seq3693 120 2e-21 seq3072 96.9 3e-14 >seq9631 Length=20267 Score = 123 bits (136), Expect = 2e-22 Identities = 114/143 (80%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 550390 AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTAC 550449 |||||| |||| || || || || || || || || |||||||| || ||||| ||||| Sbjct 14237 AGTTACCAATGCTGTGATCACGGTGCCCGCCTACTTCAATGACTCCCAGCGTCAGGCTAC 14178 Query 550450 TAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGC 550509 |||||||||||| ||| |||| |||||||| || ||||| ||||| || || || || Sbjct 14177 CAAAGATGCTGGAACTATCTCTGGTCTTAATGTGCTGCGTATCATCAACGAGCCAACAGC 14118 Query 550510 TGCTGCACTTGCATATGGACTTG 550532 ||||||| |||||||||| |||| Sbjct 14117 TGCTGCAATTGCATATGG-CTTG 14096 Score = 96.9 bits (106), Expect = 3e-14 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 549956 TATATTTTGACATA--AGATATAATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAA 550013 |||||||| | || ||| | |||||||| |||| | || || || | || | Sbjct 15147 TATATTTTTATATTTTAGAAAACATGTCAAAGGGGCCAGCTGTCGGCATCGACCTTGGGA 15088 Query 550014 CCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATC 550073 |||| || |||||| || |||| ||| |||| |||||||| || ||||||||||| | Sbjct 15087 CCACCTACTCTTGTGTAGGAGTTTTCCAACATGGGAAAGTTGAGATCATTGCCAATGACC 15028 Query 550074 AAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGA-ACATTTAGTTGGT 550132 | |||||||| || || || ||| || | ||||| || ||||| | ||| | |||| Sbjct 15027 AGGGTAACAGGACCACACCCAGTTACGTAGCATTCACTGATACTGAGAGATTGA-TTGGG 14969 Query 550133 GATGCAGCAAAATATCAAG 550151 |||||||| || |||||| Sbjct 14968 GATGCAGCGAAGAATCAAG 14950 Score = 91.5 bits (100), Expect = 1e-12 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || ||||||||||||| || || || || || || || |||||||| || |||| Sbjct 19620 ATGCTGTTGTAACTGTACCAGCTTACTTCAACGATTCTCAGCGGCAAGCTACAAAGGATG 19679 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || ||| |||| || ||||| || | ||||| || || || ||||||||||| Sbjct 19680 CCGGGACCATTTCTGGGCTAAATGTACTAAGAATTATAAACGAGCCCACTGCTGCTGCCA 19739 Query 550518 TTGCATATGGACTTG 550532 |||| ||||| |||| Sbjct 19740 TTGCCTATGG-CTTG 19753 >seq3693 Length=50134 Score = 120 bits (132), Expect = 2e-21 Identities = 358/547 (65%), Gaps = 8/547 (1%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || ||| | |||||||| || || || ||||| | || |||| || || Sbjct 42341 ATCGGGATTGATCTGGGAACCACCTACTCCTGCGTGGGTGTGTTTCAGCATGGAAAGGTG 42282 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| ||||| ||||| || || |||||||| || || ||||| | ||||| || Sbjct 42281 GAAATCATTGCTAATGACCAGGGCAACAGAACCACCCCCAGCTATGTAGCCTTCACAGAC 42222 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTACCAAT 550171 || || | |||| ||||| || || | || | ||| || || || | ||| Sbjct 42221 ACCGAGAGGCTCATTGGAGATGCTGCCAAGAACCAGGTGGCCA-TG--AACCCCAACAAC 42165 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | |||||||| || || | ||||| ||||| || | ||| | ||| ||| | Sbjct 42164 ACAGTCTTTGATGCCAAGCGGCTGATTGGCAGAAGGTTCGACGATGCCGTTGTGCAGTCT 42105 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||||||||||||||||| ||| | || | || | || || || | || ||| | Sbjct 42104 GATATGAAGCATTGGCCCTTCAGGGTGGTCAGTGATGGGGGGAAGCCCAAAGTTCAAGTT 42045 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATG 550351 | ||||| ||| || | || ||| |||| || |||||||| | || Sbjct 42044 GAATACAAAGGAGAGTACAAAACGTTCTACCCTGAAGAAATCTCCTCTATGGTGCTGGTG 41985 Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 |||||||| | | || || | | || || |||| | | ||||| || ||| Sbjct 41984 AAAATGAAGGAGATCGCTGAAGCGTACCTGGGGCAGAAAGTCTCAAACGCAGTCATCACT 41925 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT-ATTGC 550470 || ||||| ||||| || ||||| || || || || || || || || || ||| || | Sbjct 41924 GTGCCAGCGTATTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGC-GGGCGTGATCTC 41866 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 || || ||||| || || || ||||| || || || || || || | || || || || Sbjct 41865 AGGGCTCAATGTGCTGCGGATCATCAACGAGCCCACGGCAGCCGCCATCGCCTACGGCCT 41806 Query 550531 TGATAAA 550537 || ||| Sbjct 41805 GGACAAA 41799 >seq3072 Length=63529 Score = 96.9 bits (106), Expect = 3e-14 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | || || | || |||||||| || || ||||| || || || |||||||| Sbjct 39828 GTTACAAACGCTGTTGTGACGGTACCAGCTTACTTCAATGATTCCCAGCGGCAAGCTACC 39769 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || || || || ||| | || || |||||||| || || ||||||||||| |||||| Sbjct 39768 AAGGACGCCGGTACAATTTCAGGTCTAAATGTTCTGCGAATCATCAATGAACCAACTGCT 39709 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 ||||| |||| |||||| | || || Sbjct 39708 GCTGCTATTGCTTATGGATTGGACAA 39683 Score = 93.3 bits (102), Expect = 3e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | || || | || |||||||| || || ||||| || || || |||||||| Sbjct 57855 GTTACAAACGCTGTTGTGACGGTACCAGCTTACTTCAATGATTCCCAGCGGCAAGCTACC 57914 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || || || || ||| | || || |||||| | || || ||||||||||| |||||| Sbjct 57915 AAGGACGCCGGTACAATTTCAGGTCTAAATGTTTTGCGAATCATCAATGAACCAACTGCT 57974 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 ||||| |||| |||||| | || || Sbjct 57975 GCTGCTATTGCTTATGGATTGGACAA 58000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4012175168732600