Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq246 147 2e-30 seq1813 91.5 1e-13 >seq246 Length=269734 Score = 147 bits (162), Expect = 2e-30 Identities = 137/174 (79%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 ||||| |||| ||| || |||||||||||||| || | |||||||||||||| ||||| Sbjct 46568 AGCCCAGTGATGTGGGCAATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 46627 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || | ||||||||| || |||| |||||| ||||| || || ||||| || || | | Sbjct 46628 ACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 46687 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 30042 || || ||||| |||| || |||||| || || || ||||| ||| || |||| Sbjct 46688 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 46741 Score = 127 bits (140), Expect = 2e-24 Identities = 129/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 |||||| |||| || || || || || ||||||||||| ||||| || || |||| ||| Sbjct 47368 CATGTCTTTGTATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTC 47427 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 || || ||||||| || || |||||||||||||| || | ||| || || || || Sbjct 47428 CCCTTCCTCCCTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATC 47487 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 ||| || || || || ||||| || ||||||||||| ||||| ||||| Sbjct 47488 CCAAATTTTCACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCC 47535 >seq1813 Length=138402 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166 ||| |||||||| || | || ||||||| | |||| ||||| ||| ||| || || || Sbjct 83101 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 83160 Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 |||||| ||||| | |||||| ||||| ||||||||||| ||| Sbjct 83161 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 83203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407005366059020