Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq14568 123 5e-23 seq5979 114 2e-20 seq896 102 2e-16 seq7729 93.3 8e-14 seq50814 86.0 1e-11 >seq14568 Length=18141 Score = 123 bits (136), Expect = 5e-23 Identities = 111/137 (81%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| || || || |||||||| || ||||||||| |||||||||||| Sbjct 7149 GGTGAGCGTGTGGTGGCATTCGCAGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCT 7090 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 |||||||||||||| ||| | | | || | |||||| || ||| ||| ||||||||||| Sbjct 7089 GCCATCTTCTGGCTGAAGAA-ACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCT 7031 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||| | ||||||| Sbjct 7030 CATCAGCCGAGACGAGG 7014 >seq5979 Length=32993 Score = 114 bits (126), Expect = 2e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 ||||||| |||||||||||| |||||||| || || | |||||||| | | ||||||| Sbjct 2773 ACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCCGCTGC 2714 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 |||||| || |||| ||| |||| |||| ||||| || |||||| |||||| ||| Sbjct 2713 TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGC 2654 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGG 222177 ||||| || | ||| | || ||||| Sbjct 2653 TCCAGGTACATGGCGAATGCCCCGGG 2628 Score = 111 bits (122), Expect = 3e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 221727 CGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786 || |||||||||||||| |||| |||| | |||||| || || |||||||||||||||| Sbjct 3652 CGCCCACCTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGA 3593 Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGG 221846 |||| ||||||| | || || |||||| ||| ||||||||||| ||||| ||| Sbjct 3592 TGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGG 3533 Query 221847 GACCGCCAGTCTCC 221860 | ||| |||||| Sbjct 3532 GCGTGCCCGTCTCC 3519 Score = 98.7 bits (108), Expect = 2e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 221121 CCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGA 221180 |||| ||||| ||||| || ||||| | | ||||||||| ||| | || || | Sbjct 5711 CCACCTGGAACTCTCCGGAAAGCACGCGGCGGGTGTACAGGTTGCTGGTGTAGGGCTCCA 5652 Query 221181 TGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCA 221240 || ||||||||||||||||||||| || ||| ||| ||||||||||| |||| ||||| Sbjct 5651 TGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATGGGGGCCAGCAGCA 5592 Query 221241 GACTGTT 221247 | ||||| Sbjct 5591 GGCTGTT 5585 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 221370 CGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGCAGCG 221428 |||| | ||||||||| |||| | | ||| | |||| | || || ||||| ||| Sbjct 4758 CGTAGGTCTCGTAGGGTCCGTGCTCGGCCGCCAGCTCGCA-GCTGGCCTCCAGGGCGGCG 4700 Query 221429 TGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGC 221488 | |||||||||||| |||||| ||||||| || |||||| || |||||| Sbjct 4699 TAGTAGATGGTCTCGAAGATCTGGCTGTTGAGCAGCTGGGCCTCCGGGCTCTCGAAGGGG 4640 Query 221489 ATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTG 221547 | |||| || ||| |||||||||| ||||| || ||||| ||||| |||||||| Sbjct 4639 AAGCGCATCAGGATGAAGGCGTCGGCCAGGCCCTGCACCCCGATCCCGATCGGCCTGTG 4581 >seq896 Length=134646 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||||||||||||||| || || || ||||| ||| || |||||||| Sbjct 20727 GGGGAGCGCGTGGTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCT 20668 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||||||||| | ||| ||| ||| ||||| || || || ||||||||||| Sbjct 20667 TCCATCTTCTGGTTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTG 20608 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 20607 ATCAGCAGAGATGAGG 20592 >seq7729 Length=25563 Score = 93.3 bits (102), Expect = 8e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || ||||||||||| |||||||| || || ||| || || ||||| ||||||| |||| Sbjct 16238 GTGGCCTTTGCTGCGGTGGAGGGGATTTTCTTCTCTGGGTCCTTTGCAGCCATCTACTGG 16297 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 | ||| ||| || ||||||||| || || ||||| |||||||||||||| || Sbjct 16298 TTAAAGAAGAGAGGCCTCATGCCCGGACTCACCTACTCCAATGAGCTCATCAGCAGAGAT 16357 Query 26005 GAGG 26008 |||| Sbjct 16358 GAGG 16361 >seq50814 Length=1495 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 221370 CGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGCAGCG 221428 |||| | ||||||||| |||| | | ||| | |||| | || || ||||| ||| Sbjct 598 CGTAGGTCTCGTAGGGTCCGTGCTCGGCCGCCAGCTCGCA-GCTGGCCTCCAGGGCGGCG 540 Query 221429 TGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGC 221488 | |||||||||||| |||||| ||||||| || |||||| || |||||| Sbjct 539 TAGTAGATGGTCTCGAAGATCTGGCTGTTGAGCAGCTGGGCCTCCGGGCTCTCGAAGGGG 480 Query 221489 ATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTG 221547 | |||| || ||| |||||||||| ||||| || ||||| ||||| |||||||| Sbjct 479 AAGCGCATCAGGATGAAGGCGTCGGCCAGGCCCTGCACCCCGATCCCGATCGGCCTGTG 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 925085997305600