Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq3693 145 5e-29 seq16015 131 1e-24 seq3072 102 5e-16 seq9631 93.3 3e-13 seq1314 91.5 1e-12 >seq3693 Length=50134 Score = 145 bits (160), Expect = 5e-29 Identities = 363/547 (66%), Gaps = 6/547 (1%) Strand=Plus/Minus Query 474330 CAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAG 474389 |||| || |||||| | ||||| || ||| || || | ||| | || |||| || | Sbjct 42343 CAATCGGGATTGATCTGGGAACCACCTACTCCTGCGTGGGTGTGTTTCAGCATGGAAAGG 42284 Query 474390 TAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTG 474449 | ||||| ||||| |||||||| || || ||||| || || ||||| | || || | Sbjct 42283 TGGAAATCATTGCTAATGACCAGGGCAACAGAACCACCCCCAGCTATGTAGCCTTCACAG 42224 Query 474450 AAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATA 474509 | || || || |||||||||||||| || | || | || || || || | Sbjct 42223 ACACCGAGAGGCTCATTGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCCAACAACA 42164 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 | | |||||||| || | ||||||| | | || || ||| || ||| || |||| Sbjct 42163 CAGTCTTTGATGCCAAGCGGCTGATTGGCAGAAGGTTCGACGATGCCGTTGTGCAGTCTG 42104 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--C 474627 ||||| |||||||| || | |||| | | || ||| || || || | | ||| Sbjct 42103 ATATGAAGCATTGGCCCTTCAGGGTGGTCAGTGATGGGGGGAAGCCCAAAGTTCAAGTTG 42044 Query 474628 AATACACGCAGGTGA-AACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 |||||| ||| || || |||| || | || ||| |||| || || ||||| | | Sbjct 42043 AATACA--AAGGAGAGTACAAAAC-GTTCTACCCTGAAGAAATCTCCTCTATGGTGCTGG 41987 Query 474687 CCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 |||||||| | | ||| | || || || || |||| | | ||||| || | Sbjct 41986 TGAAAATGAAGGAGATCGCTGAAGCGTACCTGGGGCAGAAAGTCTCAAACGCAGTCATCA 41927 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| ||||| ||||| || || ||||| || || || || || || ||||| || Sbjct 41926 CTGTGCCAGCGTATTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGCGGGCGTGATCT 41867 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 |||| || ||||| | || || || || || || || |||||||| | || || || | Sbjct 41866 CAGGGCTCAATGTGCTGCGGATCATCAACGAGCCCACGGCAGCCGCCATCGCCTACGGCC 41807 Query 474867 TTGATAA 474873 | || || Sbjct 41806 TGGACAA 41800 >seq16015 Length=10507 Score = 131 bits (144), Expect = 1e-24 Identities = 360/547 (66%), Gaps = 6/547 (1%) Strand=Plus/Minus Query 474330 CAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAG 474389 |||| || |||||| | ||||| || ||| ||||| | ||| | || | || || | Sbjct 1553 CAATCGGGATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTGTTTCAGCACGGAAAGG 1494 Query 474390 TAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTG 474449 | ||||| |||||||| ||||| || || ||||| || || || || | || || | Sbjct 1493 TGGAAATCATTGCCAACGACCAGGGCAACAGAACCACCCCCAGCTACGTAGCCTTCACAG 1434 Query 474450 AAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATA 474509 | || || || || ||||||||||| || | || | || || || ||| | Sbjct 1433 ACACCGAGAGGCTGATCGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCCAATAACA 1374 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 | || || ||||| || | ||||| || | | || || ||| || ||| ||||||| Sbjct 1373 CCATCTTCGATGCCAAGCGCTTGATCGGCAGAAGGTTCGACGATCCCGTTGTGCAATCTG 1314 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA--GC 474627 ||||| || ||||| || ||||| | | | ||| || || || | | ||| | Sbjct 1313 ATATGAAGCACTGGCCCTTCAAGGTAGTCAGCGATGGAGGAAAGCCCAAAGTTGAAGTGG 1254 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 |||||| ||| || | |||| ||| || ||| |||| || || ||||| | | Sbjct 1253 AATACA--AAGGAGAGAGTAAAGCATTCAACCCTGAAGAAATCTCCTCCATGGTGCTGGT 1196 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 |||||||| | | || ||| | || || || || | || | |||| || || | Sbjct 1195 TAAAATGAAGGAGATTGCTGAG-GCCTACCTGGGGCAGAAGGTGTCAAATGCGGTCATCA 1137 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| || || || || || || ||||| || || || || ||||| || || || | Sbjct 1136 CTGTCCCCGCGTACTTCAACGACTCTCAGCGCCAGGCCACCAAAGACGCCGGCGTGATCG 1077 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | || || || ||| | | || || || || || || |||||||| | || || || | Sbjct 1076 CCGGGCTCAACGTTCTGAGGATCATCAACGAGCCCACGGCAGCCGCCATCGCCTACGGCC 1017 Query 474867 TTGATAA 474873 | ||||| Sbjct 1016 TGGATAA 1010 >seq3072 Length=63529 Score = 102 bits (112), Expect = 5e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || ||||| || || |||||||| || || ||||| || || || || || | |||| Sbjct 57873 ACGGTACCAGCTTACTTCAATGATTCCCAGCGGCAAGCTACCAAGGACGCCGGTACAATT 57932 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 ||||||| |||||||| || || || ||||||||||| || || || |||||||||| Sbjct 57933 TCAGGTCTAAATGTTTTGCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTATGGA 57992 Query 474866 CTTGATAAGAA 474876 | || ||||| Sbjct 57993 TTGGACAAGAA 58003 Score = 96.9 bits (106), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || ||||| || || |||||||| || || ||||| || || || || || | |||| Sbjct 39810 ACGGTACCAGCTTACTTCAATGATTCCCAGCGGCAAGCTACCAAGGACGCCGGTACAATT 39751 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 ||||||| |||||| | || || || ||||||||||| || || || |||||||||| Sbjct 39750 TCAGGTCTAAATGTTCTGCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTATGGA 39691 Query 474866 CTTGATAAGAA 474876 | || ||||| Sbjct 39690 TTGGACAAGAA 39680 Score = 91.5 bits (100), Expect = 1e-12 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| ||||||||||| | || || || ||| || |||| ||| | || |||| ||| Sbjct 40623 GCAGTTGGTATTGATCTGGGGACAACCTACTCCTGCGTAGGTGTCTTCCAGCATGGCAAA 40564 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || |||||||| || || || || || || ||||| ||||| |||| || Sbjct 40563 GTTGAGATCATTGCCAACGATCAGGGAAACAGGACCACACCCAGCTATGTAGCTTTCACC 40504 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCA 474493 || ||||| | || |||||||| ||||| || |||| | |||| Sbjct 40503 GATACTGAGCGGCTGATTGGAGACGCTGCAAAGAATCAGGTTGCA 40459 >seq9631 Length=20267 Score = 93.3 bits (102), Expect = 3e-13 Identities = 107/143 (75%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||| || |||| || || || || || || || || ||||| || || ||||| || || Sbjct 14237 AGTTACCAATGCTGTGATCACGGTGCCCGCCTACTTCAATGACTCCCAGCGTCAGGCTAC 14178 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 |||||||| |||| || | ||||||||||| | ||||| || || || |||||||| Sbjct 14177 CAAAGATGCTGGAACTATCTCTGGTCTTAATGTGCTGCGTATCATCAACGAGCCAACAGC 14118 Query 474847 AGCCGCACTTGCTTATGGTCTTG 474869 || ||| |||| ||||| |||| Sbjct 14117 TGCTGCAATTGCATATGG-CTTG 14096 Score = 89.7 bits (98), Expect = 3e-12 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 474347 GGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAAT 474406 || || || ||| |||||||| |||| ||| |||| ||||| || || ||||||||| Sbjct 15091 GGGACCACCTACTCTTGTGTAGGAGTTTTCCAACATGGGAAAGTTGAGATCATTGCCAAT 15032 Query 474407 GACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGA-ACATCTTAT 474465 ||||| ||||| || || ||||| || || | || ||||| ||||| | || | || Sbjct 15031 GACCAGGGTAACAGGACCACACCCAGTTACGTAGCATTCACTGATACTGAGAGAT-TGAT 14973 Query 474466 TGGAGATGCTGCTAAATATCAAGCTGCA 474493 ||| ||||| || || |||||| |||| Sbjct 14972 TGGGGATGCAGCGAAGAATCAAGTTGCA 14945 >seq1314 Length=105107 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 44362 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 44421 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || |||||||| Sbjct 44422 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAAT 44481 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || ||||| || || Sbjct 44482 GGTCTTGCCAGTCAGGGTTTTCACGAAGATCTG 44514 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 43906 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 43965 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || ||||| || Sbjct 43966 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 44025 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || || Sbjct 44026 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 44058 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 44134 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 44193 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || ||||| || Sbjct 44194 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 44253 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || || Sbjct 44254 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 44286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3254292420613520