Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq8027 333 3e-86 seq385 214 2e-50 >seq8027 Length=58046 Score = 333 bits (368), Expect = 3e-86 Identities = 638/934 (68%), Gaps = 11/934 (1%) Strand=Plus/Minus Query 160062 TCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGG 160121 ||||| || || ||||||| ||| |||| |||||| || || ||||| || || Sbjct 52202 TCCAGGCAGTGCACGGCGATGGGGTCGGCGTCGGTGTCGAACTTGTTGGCGAAGAGCTGC 52143 Query 160122 TGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATG 160181 | ||||| || |||||| || ||| ||| ||| | ||||||| ||| || | | Sbjct 52142 GGC---TTCTGCAGCATCCAGCCCAGGTCGCCGACGCCGTAGACGCAGATGGACCGCACG 52086 Query 160182 TGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGC 160241 || ||| |||| |||||||||| || || |||||| | | || || |||||||| Sbjct 52085 TGGTGGCCCCTGCAGGGCGGGTACATGGCGCCCTTCGCCTCCGCCCCCTCAAAGTACTGC 52026 Query 160242 CACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGA 160301 |||||||| | || ||| | || | | ||| | |||||| || | |||| Sbjct 52025 CACTTCACCAGCCGGGCGAGGGCGTTGACGTCCGTCACGTCGTAGCGGTGGTTGCTGGGA 51966 Query 160302 ACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTG 160361 | | ||||| ||||||||||| | ||| || || ||||||||| |||||||||||| Sbjct 51965 AGCGACCCGGGCACGCCGGGCATCCTCTGCAGCGTCGCCCACAGGAACTCGTCGGGGCTG 51906 Query 160362 TACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG---TCCCGCAGAACGTGA 160418 || |||||| | ||| ||||| | | | ||| |||| ||| ||| ||| Sbjct 51905 TAGCCGTCCTTGGCCCACTCCATCAGC-CGCCGCGC--CCTGGGGTCCTCCAGCACGAAG 51849 Query 160419 GTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTATGGGTATA 160478 ||| | | | | | || || | ||| || | ||| | ||| ||||| | | Sbjct 51848 CGGACGAACGCCCGGCTGACCACGACGTAGGCCCCGCCCGCGAACATCGGCGTCTCGACG 51789 Query 160479 GGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCGCGTGTCGC 160538 || |||| | | ||||||| | || | | | || | | ||| | ||| ||| Sbjct 51788 GGAGGCGGGGCCTTGTCCTTCTCCGTCCTCCGGATGGCGCCGTCCGCCACCTCGTAGCGC 51729 Query 160539 TTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGTTGGCACCG 160598 |||||||||| || |||| || ||| | |||||||| || ||||| || Sbjct 51728 TTCTTCCACCGCGCCTCCTTGGAGGGCGGCGTCTTCTCCGTCTCCAGGCTGTTCTTCCCC 51669 Query 160599 TCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCG 160658 | || | ||||||| || ||||| ||||| ||||| ||||| ||||| ||| Sbjct 51668 TGCAGGGCCCTCAGCTGGCGCACCATCTCCAGGTTGGTCTTCAGCGGGAAGTCCTGGCCG 51609 Query 160659 CACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCATGCAATTA 160718 |||| ||| | | |||| |||| ||||| ||| || |||||| | |||||| || Sbjct 51608 CACAGGTTGACGAAGTACCTCCAGGGGGCGCTGTGGTTGTACAGGTCGCCCATGCAGTTG 51549 Query 160719 ATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACA 160778 | || |||||||| | ||||||| |||||||| ||| |||| || ||||| | Sbjct 51548 AGGTCGGCCTGCACCCTGCTCCAGCTGGCGTACACCACGCTCTCCAGCCGGCTGGCGATG 51489 Query 160779 AAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGCC 160838 |||||||| ||||| || || |||| | ||| |||| | ||| || |||| Sbjct 51488 AAGACGTTGTCGAAGCAGGAGGCGATCTGCCGCACGGCCAAGAGGAAGGTCGACGGCGCC 51429 Query 160839 TTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTC 160898 || | ||||||||| ||||| ||||||||||| |||||||||| |||||| |||| |||| Sbjct 51428 TTGCTGTCCACGTGGACGCAGTACAGGTTCTGGGGCGCGTAGACGGCCCTCAGCAGCCTC 51369 Query 160899 TCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCC 160958 ||||| ||| ||||| || |||| ||| || ||||| || || || |||| || |||| Sbjct 51368 TCGAAGGTCTGGATCTTGTGGTGGACCACAATGGAGTACGCGATGGGGAACTGGGCCTCC 51309 Query 160959 TCGCGACTCAG-GGACCCGGTCAGGTACTTTCGC 160991 ||||| ||||| || ||| || |||||| ||| Sbjct 51308 TCGCGGCTCAGCGGGAGCGG-CACGTACTTGCGC 51276 >seq385 Length=209995 Score = 214 bits (236), Expect = 2e-50 Identities = 601/906 (66%), Gaps = 20/906 (2%) Strand=Plus/Plus Query 160084 CGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGT 160143 |||| || || ||| || || || ||||| || || || | ||| || |||||| Sbjct 166727 CGTCCACTTCAGGGTCAAACTTGTTGGCGAAAAGGTGATGCTGG--CTG-AGCATCCAGC 166783 Query 160144 GCACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGT 160203 | | ||| |||| ||| | ||||| |||| | ||| ||| |||| ||||||| Sbjct 166784 GGAGGTCCCCGGTGCCGTAGACGCACACGGCTCTCCGGTGAGTCCCGGTGCAGGGCGGGT 166843 Query 160204 ACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCG 160263 | | || || ||| |||||| ||||| ||| ||||||||| | | ||| || | Sbjct 166844 AGGGCGCACCCTTCCTCACGTCCCCTTCCAGGTAGCTCCACTTCACCAGGCGGGCGATGG 166903 Query 160264 CCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCA 160323 ||| |||||| || | ||| ||| | ||||| || ||||| ||| ||||| Sbjct 166904 CCTCCATGTCCGACTGCTGGTACTTGCTGTTGGGGGGATAGGAGCCGGGGACGGAGGGCA 166963 Query 160324 TACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCA 160383 | | ||| ||||||||||||||||||||||| |||||||| || ||||| ||| || | Sbjct 166964 TTCTCTGCAGGGTGGCCCACAGGTGTTCGTCAGGGCTGTAGGTATCCTTCTCCCACTCGA 167023 Query 160384 TGAACTCTCCGATTAACCTGTCCCGCAGA-ACGTGAGTAACGTAGGATCTGGTCACGACA 160442 ||| ||| |||| | |||| | ||| | || | | ||| || || Sbjct 167024 TGAGGGA-CCGCACCTCCTGGCTTTCAGACAGGTGCCTCACAAACTCCCGGGTGACCACG 167082 Query 160443 AAGTACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCG 160502 ||||| ||| | || ||||| || || || || || || | || || | | | | Sbjct 167083 AAGTAGGCGTTCCCAGAGAACATAGGGGTGCTGATGGGGGGAGGATCCTTCTTCAG---G 167139 Query 160503 GTGTTAGACACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGC 160562 || | | ||| | | | || ||| || | | |||| | | | |||||| Sbjct 167140 GTTGTCCTGATCACGGCGTGCGTCACGTTGTGGCGGTACATCCAGCGGCCTTTCTTGTA- 167198 Query 160563 GGTGG-CATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTG-A 160620 | || | | ||| | ||| | ||||| |||| |||| ||| || ||| | | Sbjct 167199 GTTGTTCGTCTCTTCGGACTCCATGCTGTTCCTGCCGTGGAGCTGTTTGAGA-GCTCGCA 167257 Query 160621 CGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCC 160680 ||||||| |||||| |||| || |||||||| ||||| ||| | || |||| || Sbjct 167258 CGATCTCCGCGTTCGTTTTGATGGGGAAGTCGGTGCCGCAGGTGTTGAGCAGGTACCGCC 167317 Query 160681 ATTTCG---CGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGC 160737 | || || | || || |||||| |||||| || | || || ||||| ||| Sbjct 167318 AC--CGGACCGGCGACTTCATG-AGGTCCTCCATGCAGTTGAGGTCCGCTTGCACCCGGG 167374 Query 160738 TCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACG 160797 |||||| ||||| | ||| |||| || | ||||||||||| ||||| | || | Sbjct 167375 ACCAGGACGCGTATATCACGCTCTCCAGCCTGCTGGCCACAAACACGTTGGGCAGGCAGG 167434 Query 160798 ACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGC 160857 | ||||| ||| || || || ||| || | ||| |||||||||||||||| Sbjct 167435 AGACGATGCCCTGGACGGCAAGCCTGAAGGCCTCTGGGGACTTGCGGTCCACGTGCACGC 167494 Query 160858 AATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTAT 160917 | |||| ||| || ||| |||| || |||| || | ||||||||||||||| || || | Sbjct 167495 AGTACACGTTGTGGGGCACGTATATAGCCCGCAGGAGCCTCTCGAACATCTCGATTTTCT 167554 Query 160918 GATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCT-CGCGACTCAGGGACCCG 160976 |||| ||| || ||||| || || || ||||| |||||| |||| ||| | | || | Sbjct 167555 CGTGGACCACCATGGAGTACGCGATGGGGAACTCCATCTCCTCCGCG-CTCGGAGTCCAG 167613 Query 160977 GTCAGG 160982 || ||| Sbjct 167614 GTGAGG 167619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574883338202400