Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq3072 104 2e-16
seq9631 95.1 9e-14
>seq3072
Length=63529
Score = 104 bits (114), Expect = 2e-16
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403
||||| |||| ||||||||||||||||||||| || |||| ||||||||| ||||| | |
Sbjct 57991 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAAAACATTTAGACCTGAA 57932
Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463
||| | || || || || || ||||| | || ||||| || || || || || || ||
Sbjct 57931 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 57872
Query 282464 ATAACGGCATCTGTTAC 282480
| ||| || | ||| ||
Sbjct 57871 ACAACAGCGTTTGTAAC 57855
Score = 98.7 bits (108), Expect = 7e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403
||||| |||| ||||||||||||||||||||| || |||| || |||||| ||||| | |
Sbjct 39692 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAGAACATTTAGACCTGAA 39751
Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463
||| | || || || || || ||||| | || ||||| || || || || || || ||
Sbjct 39752 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 39811
Query 282464 ATAACGGCATCTGTTAC 282480
| ||| || | ||| ||
Sbjct 39812 ACAACAGCGTTTGTAAC 39828
>seq9631
Length=20267
Score = 95.1 bits (104), Expect = 9e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || | ||||| |||| ||||||||||| || || || |||||||| | |||
Sbjct 19761 TTTTTGTCCAAGCCATAGGCAATGGCAGCAGCAGTGGGCTCGTTTATAATTCTTAGTACA 19702
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || |||| ||| | || ||||| || || ||||| | || |||||||| || ||
Sbjct 19701 TTTAGCCCAGAAATGGTCCCGGCATCCTTTGTAGCTTGCCGCTGAGAATCGTTGAAGTAA 19642
Query 282452 GCAGGAACAGTAATAACGGCAT 282473
|| || ||||| | ||| ||||
Sbjct 19641 GCTGGTACAGTTACAACAGCAT 19620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3724736134125240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |